Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27683 | 83272;83273;83274 | chr2:178563085;178563084;178563083 | chr2:179427812;179427811;179427810 |
N2AB | 26042 | 78349;78350;78351 | chr2:178563085;178563084;178563083 | chr2:179427812;179427811;179427810 |
N2A | 25115 | 75568;75569;75570 | chr2:178563085;178563084;178563083 | chr2:179427812;179427811;179427810 |
N2B | 18618 | 56077;56078;56079 | chr2:178563085;178563084;178563083 | chr2:179427812;179427811;179427810 |
Novex-1 | 18743 | 56452;56453;56454 | chr2:178563085;178563084;178563083 | chr2:179427812;179427811;179427810 |
Novex-2 | 18810 | 56653;56654;56655 | chr2:178563085;178563084;178563083 | chr2:179427812;179427811;179427810 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1198736450 | 0.002 | 0.999 | N | 0.553 | 0.394 | 0.520694202979 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/R | rs1198736450 | 0.002 | 0.999 | N | 0.553 | 0.394 | 0.520694202979 | gnomAD-4.0.0 | 1.59135E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9398 | likely_pathogenic | 0.9268 | pathogenic | 0.042 | Stabilizing | 0.999 | D | 0.642 | neutral | None | None | None | None | I |
K/C | 0.978 | likely_pathogenic | 0.9754 | pathogenic | -0.158 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
K/D | 0.9508 | likely_pathogenic | 0.9401 | pathogenic | 0.059 | Stabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | I |
K/E | 0.8555 | likely_pathogenic | 0.8085 | pathogenic | 0.069 | Stabilizing | 0.999 | D | 0.617 | neutral | D | 0.525133494 | None | None | I |
K/F | 0.9967 | likely_pathogenic | 0.996 | pathogenic | -0.144 | Destabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | I |
K/G | 0.9198 | likely_pathogenic | 0.9062 | pathogenic | -0.163 | Destabilizing | 1.0 | D | 0.574 | neutral | None | None | None | None | I |
K/H | 0.7792 | likely_pathogenic | 0.7499 | pathogenic | -0.43 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | I |
K/I | 0.9809 | likely_pathogenic | 0.975 | pathogenic | 0.502 | Stabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | I |
K/L | 0.9431 | likely_pathogenic | 0.9312 | pathogenic | 0.502 | Stabilizing | 1.0 | D | 0.574 | neutral | None | None | None | None | I |
K/M | 0.9127 | likely_pathogenic | 0.8849 | pathogenic | 0.247 | Stabilizing | 1.0 | D | 0.623 | neutral | N | 0.515565553 | None | None | I |
K/N | 0.9084 | likely_pathogenic | 0.8863 | pathogenic | 0.219 | Stabilizing | 1.0 | D | 0.671 | neutral | N | 0.492648678 | None | None | I |
K/P | 0.9829 | likely_pathogenic | 0.9838 | pathogenic | 0.377 | Stabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | I |
K/Q | 0.5652 | likely_pathogenic | 0.5008 | ambiguous | 0.07 | Stabilizing | 1.0 | D | 0.655 | neutral | N | 0.517860805 | None | None | I |
K/R | 0.1296 | likely_benign | 0.1216 | benign | -0.068 | Destabilizing | 0.999 | D | 0.553 | neutral | N | 0.480342567 | None | None | I |
K/S | 0.9362 | likely_pathogenic | 0.9218 | pathogenic | -0.243 | Destabilizing | 0.999 | D | 0.62 | neutral | None | None | None | None | I |
K/T | 0.8463 | likely_pathogenic | 0.8148 | pathogenic | -0.085 | Destabilizing | 1.0 | D | 0.642 | neutral | N | 0.497826465 | None | None | I |
K/V | 0.9651 | likely_pathogenic | 0.9558 | pathogenic | 0.377 | Stabilizing | 1.0 | D | 0.624 | neutral | None | None | None | None | I |
K/W | 0.9912 | likely_pathogenic | 0.9895 | pathogenic | -0.182 | Destabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | I |
K/Y | 0.9808 | likely_pathogenic | 0.9771 | pathogenic | 0.17 | Stabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.