Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27693 | 83302;83303;83304 | chr2:178563055;178563054;178563053 | chr2:179427782;179427781;179427780 |
N2AB | 26052 | 78379;78380;78381 | chr2:178563055;178563054;178563053 | chr2:179427782;179427781;179427780 |
N2A | 25125 | 75598;75599;75600 | chr2:178563055;178563054;178563053 | chr2:179427782;179427781;179427780 |
N2B | 18628 | 56107;56108;56109 | chr2:178563055;178563054;178563053 | chr2:179427782;179427781;179427780 |
Novex-1 | 18753 | 56482;56483;56484 | chr2:178563055;178563054;178563053 | chr2:179427782;179427781;179427780 |
Novex-2 | 18820 | 56683;56684;56685 | chr2:178563055;178563054;178563053 | chr2:179427782;179427781;179427780 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs1329220257 | -0.903 | 0.618 | N | 0.589 | 0.057 | 0.252162846088 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
L/V | rs1329220257 | -0.903 | 0.618 | N | 0.589 | 0.057 | 0.252162846088 | gnomAD-4.0.0 | 1.59144E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85886E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8627 | likely_pathogenic | 0.8395 | pathogenic | -2.736 | Highly Destabilizing | 0.968 | D | 0.693 | prob.neutral | None | None | None | None | I |
L/C | 0.8824 | likely_pathogenic | 0.8651 | pathogenic | -2.102 | Highly Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | I |
L/D | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -3.289 | Highly Destabilizing | 0.998 | D | 0.853 | deleterious | None | None | None | None | I |
L/E | 0.998 | likely_pathogenic | 0.9968 | pathogenic | -3.014 | Highly Destabilizing | 0.998 | D | 0.835 | deleterious | None | None | None | None | I |
L/F | 0.8202 | likely_pathogenic | 0.779 | pathogenic | -1.685 | Destabilizing | 0.988 | D | 0.775 | deleterious | N | 0.45453048 | None | None | I |
L/G | 0.9868 | likely_pathogenic | 0.9811 | pathogenic | -3.31 | Highly Destabilizing | 0.995 | D | 0.833 | deleterious | None | None | None | None | I |
L/H | 0.995 | likely_pathogenic | 0.9922 | pathogenic | -2.691 | Highly Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | I |
L/I | 0.2866 | likely_benign | 0.2828 | benign | -1.05 | Destabilizing | 0.142 | N | 0.341 | neutral | N | 0.466329467 | None | None | I |
L/K | 0.9964 | likely_pathogenic | 0.9942 | pathogenic | -2.429 | Highly Destabilizing | 0.995 | D | 0.822 | deleterious | None | None | None | None | I |
L/M | 0.2699 | likely_benign | 0.2545 | benign | -0.994 | Destabilizing | 0.991 | D | 0.76 | deleterious | None | None | None | None | I |
L/N | 0.9974 | likely_pathogenic | 0.9963 | pathogenic | -2.969 | Highly Destabilizing | 0.998 | D | 0.851 | deleterious | None | None | None | None | I |
L/P | 0.9972 | likely_pathogenic | 0.9956 | pathogenic | -1.597 | Destabilizing | 0.998 | D | 0.85 | deleterious | None | None | None | None | I |
L/Q | 0.986 | likely_pathogenic | 0.979 | pathogenic | -2.749 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | I |
L/R | 0.9934 | likely_pathogenic | 0.9898 | pathogenic | -2.188 | Highly Destabilizing | 0.998 | D | 0.847 | deleterious | None | None | None | None | I |
L/S | 0.9872 | likely_pathogenic | 0.9806 | pathogenic | -3.626 | Highly Destabilizing | 0.994 | D | 0.817 | deleterious | N | 0.504261342 | None | None | I |
L/T | 0.9562 | likely_pathogenic | 0.9412 | pathogenic | -3.188 | Highly Destabilizing | 0.991 | D | 0.805 | deleterious | None | None | None | None | I |
L/V | 0.2706 | likely_benign | 0.2591 | benign | -1.597 | Destabilizing | 0.618 | D | 0.589 | neutral | N | 0.482082779 | None | None | I |
L/W | 0.9913 | likely_pathogenic | 0.9864 | pathogenic | -2.049 | Highly Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | I |
L/Y | 0.9892 | likely_pathogenic | 0.9845 | pathogenic | -1.777 | Destabilizing | 0.995 | D | 0.849 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.