Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27698 | 83317;83318;83319 | chr2:178563040;178563039;178563038 | chr2:179427767;179427766;179427765 |
N2AB | 26057 | 78394;78395;78396 | chr2:178563040;178563039;178563038 | chr2:179427767;179427766;179427765 |
N2A | 25130 | 75613;75614;75615 | chr2:178563040;178563039;178563038 | chr2:179427767;179427766;179427765 |
N2B | 18633 | 56122;56123;56124 | chr2:178563040;178563039;178563038 | chr2:179427767;179427766;179427765 |
Novex-1 | 18758 | 56497;56498;56499 | chr2:178563040;178563039;178563038 | chr2:179427767;179427766;179427765 |
Novex-2 | 18825 | 56698;56699;56700 | chr2:178563040;178563039;178563038 | chr2:179427767;179427766;179427765 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.656 | N | 0.529 | 0.219 | 0.365703291355 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0881 | likely_benign | 0.1035 | benign | -0.833 | Destabilizing | 0.656 | D | 0.529 | neutral | N | 0.50333407 | None | None | N |
T/C | 0.4663 | ambiguous | 0.5274 | ambiguous | -0.448 | Destabilizing | 0.998 | D | 0.68 | prob.neutral | None | None | None | None | N |
T/D | 0.6881 | likely_pathogenic | 0.7219 | pathogenic | 0.108 | Stabilizing | 0.978 | D | 0.662 | neutral | None | None | None | None | N |
T/E | 0.581 | likely_pathogenic | 0.6173 | pathogenic | 0.195 | Stabilizing | 0.978 | D | 0.654 | neutral | None | None | None | None | N |
T/F | 0.4921 | ambiguous | 0.5764 | pathogenic | -0.706 | Destabilizing | 0.956 | D | 0.747 | deleterious | None | None | None | None | N |
T/G | 0.2733 | likely_benign | 0.3107 | benign | -1.159 | Destabilizing | 0.926 | D | 0.693 | prob.neutral | None | None | None | None | N |
T/H | 0.3487 | ambiguous | 0.3966 | ambiguous | -1.237 | Destabilizing | 0.998 | D | 0.732 | prob.delet. | None | None | None | None | N |
T/I | 0.2826 | likely_benign | 0.3315 | benign | -0.031 | Destabilizing | 0.032 | N | 0.387 | neutral | N | 0.512185627 | None | None | N |
T/K | 0.2948 | likely_benign | 0.3253 | benign | -0.304 | Destabilizing | 0.978 | D | 0.661 | neutral | None | None | None | None | N |
T/L | 0.1482 | likely_benign | 0.1741 | benign | -0.031 | Destabilizing | 0.514 | D | 0.574 | neutral | None | None | None | None | N |
T/M | 0.1139 | likely_benign | 0.1351 | benign | -0.062 | Destabilizing | 0.988 | D | 0.679 | prob.neutral | None | None | None | None | N |
T/N | 0.1613 | likely_benign | 0.1761 | benign | -0.496 | Destabilizing | 0.99 | D | 0.565 | neutral | N | 0.49633074 | None | None | N |
T/P | 0.07 | likely_benign | 0.0754 | benign | -0.266 | Destabilizing | 0.014 | N | 0.323 | neutral | N | 0.404442086 | None | None | N |
T/Q | 0.2951 | likely_benign | 0.3321 | benign | -0.464 | Destabilizing | 0.993 | D | 0.695 | prob.neutral | None | None | None | None | N |
T/R | 0.2837 | likely_benign | 0.3145 | benign | -0.29 | Destabilizing | 0.993 | D | 0.692 | prob.neutral | None | None | None | None | N |
T/S | 0.1437 | likely_benign | 0.1657 | benign | -0.865 | Destabilizing | 0.904 | D | 0.512 | neutral | N | 0.468682779 | None | None | N |
T/V | 0.1898 | likely_benign | 0.2235 | benign | -0.266 | Destabilizing | 0.514 | D | 0.519 | neutral | None | None | None | None | N |
T/W | 0.8033 | likely_pathogenic | 0.8395 | pathogenic | -0.686 | Destabilizing | 0.998 | D | 0.735 | prob.delet. | None | None | None | None | N |
T/Y | 0.4845 | ambiguous | 0.5138 | ambiguous | -0.386 | Destabilizing | 0.978 | D | 0.745 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.