Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2770 | 8533;8534;8535 | chr2:178770484;178770483;178770482 | chr2:179635211;179635210;179635209 |
N2AB | 2770 | 8533;8534;8535 | chr2:178770484;178770483;178770482 | chr2:179635211;179635210;179635209 |
N2A | 2770 | 8533;8534;8535 | chr2:178770484;178770483;178770482 | chr2:179635211;179635210;179635209 |
N2B | 2724 | 8395;8396;8397 | chr2:178770484;178770483;178770482 | chr2:179635211;179635210;179635209 |
Novex-1 | 2724 | 8395;8396;8397 | chr2:178770484;178770483;178770482 | chr2:179635211;179635210;179635209 |
Novex-2 | 2724 | 8395;8396;8397 | chr2:178770484;178770483;178770482 | chr2:179635211;179635210;179635209 |
Novex-3 | 2770 | 8533;8534;8535 | chr2:178770484;178770483;178770482 | chr2:179635211;179635210;179635209 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1329726455 | None | None | N | 0.152 | 0.115 | 0.313518423057 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
A/V | rs1329726455 | None | None | N | 0.152 | 0.115 | 0.313518423057 | gnomAD-4.0.0 | 1.23906E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69489E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3667 | ambiguous | 0.3632 | ambiguous | -0.667 | Destabilizing | 0.002 | N | 0.285 | neutral | None | None | None | None | I |
A/D | 0.2015 | likely_benign | 0.1964 | benign | -0.86 | Destabilizing | 0.001 | N | 0.297 | neutral | N | 0.501065761 | None | None | I |
A/E | 0.2005 | likely_benign | 0.193 | benign | -1.018 | Destabilizing | 0.124 | N | 0.399 | neutral | None | None | None | None | I |
A/F | 0.2614 | likely_benign | 0.2773 | benign | -1.108 | Destabilizing | 0.497 | N | 0.452 | neutral | None | None | None | None | I |
A/G | 0.1179 | likely_benign | 0.1224 | benign | -0.543 | Destabilizing | 0.081 | N | 0.333 | neutral | N | 0.511490213 | None | None | I |
A/H | 0.3542 | ambiguous | 0.3391 | benign | -0.67 | Destabilizing | 0.667 | D | 0.439 | neutral | None | None | None | None | I |
A/I | 0.1842 | likely_benign | 0.1835 | benign | -0.456 | Destabilizing | 0.046 | N | 0.396 | neutral | None | None | None | None | I |
A/K | 0.3054 | likely_benign | 0.2843 | benign | -0.832 | Destabilizing | 0.22 | N | 0.388 | neutral | None | None | None | None | I |
A/L | 0.1308 | likely_benign | 0.1352 | benign | -0.456 | Destabilizing | 0.055 | N | 0.372 | neutral | None | None | None | None | I |
A/M | 0.1661 | likely_benign | 0.1579 | benign | -0.277 | Destabilizing | 0.497 | N | 0.382 | neutral | None | None | None | None | I |
A/N | 0.1465 | likely_benign | 0.138 | benign | -0.426 | Destabilizing | 0.004 | N | 0.224 | neutral | None | None | None | None | I |
A/P | 0.5081 | ambiguous | 0.5244 | ambiguous | -0.424 | Destabilizing | 0.602 | D | 0.387 | neutral | N | 0.505451618 | None | None | I |
A/Q | 0.2405 | likely_benign | 0.2245 | benign | -0.759 | Destabilizing | 0.667 | D | 0.384 | neutral | None | None | None | None | I |
A/R | 0.2769 | likely_benign | 0.2533 | benign | -0.303 | Destabilizing | 0.497 | N | 0.386 | neutral | None | None | None | None | I |
A/S | 0.0752 | likely_benign | 0.0743 | benign | -0.595 | Destabilizing | 0.042 | N | 0.376 | neutral | N | 0.450708242 | None | None | I |
A/T | 0.0705 | likely_benign | 0.0671 | benign | -0.684 | Destabilizing | 0.001 | N | 0.223 | neutral | N | 0.461279095 | None | None | I |
A/V | 0.0997 | likely_benign | 0.1015 | benign | -0.424 | Destabilizing | None | N | 0.152 | neutral | N | 0.474903754 | None | None | I |
A/W | 0.7022 | likely_pathogenic | 0.7055 | pathogenic | -1.263 | Destabilizing | 0.958 | D | 0.521 | neutral | None | None | None | None | I |
A/Y | 0.3985 | ambiguous | 0.4222 | ambiguous | -0.918 | Destabilizing | 0.667 | D | 0.449 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.