Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27714 | 83365;83366;83367 | chr2:178562992;178562991;178562990 | chr2:179427719;179427718;179427717 |
N2AB | 26073 | 78442;78443;78444 | chr2:178562992;178562991;178562990 | chr2:179427719;179427718;179427717 |
N2A | 25146 | 75661;75662;75663 | chr2:178562992;178562991;178562990 | chr2:179427719;179427718;179427717 |
N2B | 18649 | 56170;56171;56172 | chr2:178562992;178562991;178562990 | chr2:179427719;179427718;179427717 |
Novex-1 | 18774 | 56545;56546;56547 | chr2:178562992;178562991;178562990 | chr2:179427719;179427718;179427717 |
Novex-2 | 18841 | 56746;56747;56748 | chr2:178562992;178562991;178562990 | chr2:179427719;179427718;179427717 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | None | None | 0.935 | N | 0.431 | 0.309 | 0.316494231283 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.21507E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2175 | likely_benign | 0.2104 | benign | -0.269 | Destabilizing | 0.025 | N | 0.349 | neutral | N | 0.489589896 | None | None | N |
G/C | 0.3507 | ambiguous | 0.3298 | benign | -0.946 | Destabilizing | 0.995 | D | 0.629 | neutral | D | 0.526358291 | None | None | N |
G/D | 0.2971 | likely_benign | 0.2773 | benign | -0.686 | Destabilizing | 0.935 | D | 0.431 | neutral | N | 0.51077733 | None | None | N |
G/E | 0.3524 | ambiguous | 0.3369 | benign | -0.839 | Destabilizing | 0.975 | D | 0.483 | neutral | None | None | None | None | N |
G/F | 0.8014 | likely_pathogenic | 0.7774 | pathogenic | -0.971 | Destabilizing | 0.987 | D | 0.634 | neutral | None | None | None | None | N |
G/H | 0.6036 | likely_pathogenic | 0.569 | pathogenic | -0.426 | Destabilizing | 0.997 | D | 0.566 | neutral | None | None | None | None | N |
G/I | 0.4872 | ambiguous | 0.4686 | ambiguous | -0.44 | Destabilizing | 0.975 | D | 0.631 | neutral | None | None | None | None | N |
G/K | 0.6668 | likely_pathogenic | 0.6321 | pathogenic | -0.878 | Destabilizing | 0.975 | D | 0.477 | neutral | None | None | None | None | N |
G/L | 0.686 | likely_pathogenic | 0.6717 | pathogenic | -0.44 | Destabilizing | 0.95 | D | 0.586 | neutral | None | None | None | None | N |
G/M | 0.6231 | likely_pathogenic | 0.6006 | pathogenic | -0.642 | Destabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | N |
G/N | 0.2811 | likely_benign | 0.2703 | benign | -0.534 | Destabilizing | 0.033 | N | 0.347 | neutral | None | None | None | None | N |
G/P | 0.9448 | likely_pathogenic | 0.9394 | pathogenic | -0.353 | Destabilizing | 0.987 | D | 0.546 | neutral | None | None | None | None | N |
G/Q | 0.5426 | ambiguous | 0.5095 | ambiguous | -0.799 | Destabilizing | 0.975 | D | 0.549 | neutral | None | None | None | None | N |
G/R | 0.599 | likely_pathogenic | 0.5571 | ambiguous | -0.426 | Destabilizing | 0.967 | D | 0.544 | neutral | N | 0.513489562 | None | None | N |
G/S | 0.1411 | likely_benign | 0.1371 | benign | -0.655 | Destabilizing | 0.099 | N | 0.351 | neutral | D | 0.531360459 | None | None | N |
G/T | 0.2277 | likely_benign | 0.2149 | benign | -0.742 | Destabilizing | 0.845 | D | 0.475 | neutral | None | None | None | None | N |
G/V | 0.3383 | likely_benign | 0.3235 | benign | -0.353 | Destabilizing | 0.935 | D | 0.602 | neutral | D | 0.525765425 | None | None | N |
G/W | 0.7415 | likely_pathogenic | 0.703 | pathogenic | -1.118 | Destabilizing | 0.999 | D | 0.568 | neutral | None | None | None | None | N |
G/Y | 0.6349 | likely_pathogenic | 0.6064 | pathogenic | -0.79 | Destabilizing | 0.999 | D | 0.63 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.