Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27715 | 83368;83369;83370 | chr2:178562989;178562988;178562987 | chr2:179427716;179427715;179427714 |
N2AB | 26074 | 78445;78446;78447 | chr2:178562989;178562988;178562987 | chr2:179427716;179427715;179427714 |
N2A | 25147 | 75664;75665;75666 | chr2:178562989;178562988;178562987 | chr2:179427716;179427715;179427714 |
N2B | 18650 | 56173;56174;56175 | chr2:178562989;178562988;178562987 | chr2:179427716;179427715;179427714 |
Novex-1 | 18775 | 56548;56549;56550 | chr2:178562989;178562988;178562987 | chr2:179427716;179427715;179427714 |
Novex-2 | 18842 | 56749;56750;56751 | chr2:178562989;178562988;178562987 | chr2:179427716;179427715;179427714 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | None | None | 0.012 | N | 0.283 | 0.196 | 0.585898889599 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.0996 | likely_benign | 0.092 | benign | -0.405 | Destabilizing | None | N | 0.181 | neutral | None | None | None | None | N |
I/C | 0.2995 | likely_benign | 0.2779 | benign | -0.811 | Destabilizing | 0.356 | N | 0.326 | neutral | None | None | None | None | N |
I/D | 0.1914 | likely_benign | 0.1791 | benign | -0.037 | Destabilizing | 0.072 | N | 0.393 | neutral | None | None | None | None | N |
I/E | 0.1643 | likely_benign | 0.1516 | benign | -0.12 | Destabilizing | 0.072 | N | 0.416 | neutral | None | None | None | None | N |
I/F | 0.1001 | likely_benign | 0.0996 | benign | -0.55 | Destabilizing | 0.029 | N | 0.283 | neutral | N | 0.511297405 | None | None | N |
I/G | 0.2011 | likely_benign | 0.187 | benign | -0.5 | Destabilizing | 0.031 | N | 0.357 | neutral | None | None | None | None | N |
I/H | 0.1773 | likely_benign | 0.1582 | benign | 0.096 | Stabilizing | 0.628 | D | 0.318 | neutral | None | None | None | None | N |
I/K | 0.1132 | likely_benign | 0.1001 | benign | -0.292 | Destabilizing | 0.072 | N | 0.418 | neutral | None | None | None | None | N |
I/L | 0.0713 | likely_benign | 0.0687 | benign | -0.269 | Destabilizing | None | N | 0.193 | neutral | N | 0.408343609 | None | None | N |
I/M | 0.0702 | likely_benign | 0.0679 | benign | -0.594 | Destabilizing | 0.171 | N | 0.314 | neutral | N | 0.454924048 | None | None | N |
I/N | 0.07 | likely_benign | 0.0653 | benign | -0.177 | Destabilizing | 0.055 | N | 0.401 | neutral | N | 0.384370671 | None | None | N |
I/P | 0.1783 | likely_benign | 0.1492 | benign | -0.287 | Destabilizing | 0.136 | N | 0.405 | neutral | None | None | None | None | N |
I/Q | 0.1281 | likely_benign | 0.1152 | benign | -0.315 | Destabilizing | 0.356 | N | 0.381 | neutral | None | None | None | None | N |
I/R | 0.1116 | likely_benign | 0.0967 | benign | 0.1 | Stabilizing | 0.072 | N | 0.399 | neutral | None | None | None | None | N |
I/S | 0.084 | likely_benign | 0.0741 | benign | -0.583 | Destabilizing | 0.012 | N | 0.283 | neutral | N | 0.438453085 | None | None | N |
I/T | 0.0834 | likely_benign | 0.0709 | benign | -0.565 | Destabilizing | None | N | 0.171 | neutral | N | 0.393355514 | None | None | N |
I/V | 0.0638 | likely_benign | 0.0616 | benign | -0.287 | Destabilizing | None | N | 0.167 | neutral | N | 0.402956432 | None | None | N |
I/W | 0.568 | likely_pathogenic | 0.549 | ambiguous | -0.58 | Destabilizing | 0.864 | D | 0.324 | neutral | None | None | None | None | N |
I/Y | 0.2621 | likely_benign | 0.2412 | benign | -0.347 | Destabilizing | 0.356 | N | 0.381 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.