Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27717 | 83374;83375;83376 | chr2:178562983;178562982;178562981 | chr2:179427710;179427709;179427708 |
N2AB | 26076 | 78451;78452;78453 | chr2:178562983;178562982;178562981 | chr2:179427710;179427709;179427708 |
N2A | 25149 | 75670;75671;75672 | chr2:178562983;178562982;178562981 | chr2:179427710;179427709;179427708 |
N2B | 18652 | 56179;56180;56181 | chr2:178562983;178562982;178562981 | chr2:179427710;179427709;179427708 |
Novex-1 | 18777 | 56554;56555;56556 | chr2:178562983;178562982;178562981 | chr2:179427710;179427709;179427708 |
Novex-2 | 18844 | 56755;56756;56757 | chr2:178562983;178562982;178562981 | chr2:179427710;179427709;179427708 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs757498214 | -0.045 | 0.002 | N | 0.126 | 0.084 | 0.0806252709748 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 1.14705E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/S | rs757498214 | -0.045 | 0.002 | N | 0.126 | 0.084 | 0.0806252709748 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/S | rs757498214 | -0.045 | 0.002 | N | 0.126 | 0.084 | 0.0806252709748 | gnomAD-4.0.0 | 1.97161E-05 | None | None | None | None | N | None | 7.23729E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0725 | likely_benign | 0.0784 | benign | -0.481 | Destabilizing | 0.08 | N | 0.185 | neutral | N | 0.472735364 | None | None | N |
T/C | 0.3446 | ambiguous | 0.3433 | ambiguous | -0.286 | Destabilizing | 0.991 | D | 0.352 | neutral | None | None | None | None | N |
T/D | 0.3244 | likely_benign | 0.3185 | benign | 0.101 | Stabilizing | 0.209 | N | 0.343 | neutral | None | None | None | None | N |
T/E | 0.3126 | likely_benign | 0.3145 | benign | 0.068 | Stabilizing | 0.345 | N | 0.369 | neutral | None | None | None | None | N |
T/F | 0.3497 | ambiguous | 0.3483 | ambiguous | -0.795 | Destabilizing | 0.965 | D | 0.375 | neutral | None | None | None | None | N |
T/G | 0.1347 | likely_benign | 0.1434 | benign | -0.677 | Destabilizing | 0.209 | N | 0.336 | neutral | None | None | None | None | N |
T/H | 0.25 | likely_benign | 0.2426 | benign | -0.894 | Destabilizing | 0.901 | D | 0.372 | neutral | None | None | None | None | N |
T/I | 0.2636 | likely_benign | 0.2701 | benign | -0.071 | Destabilizing | 0.662 | D | 0.398 | neutral | N | 0.503674347 | None | None | N |
T/K | 0.2209 | likely_benign | 0.2227 | benign | -0.473 | Destabilizing | 0.209 | N | 0.348 | neutral | None | None | None | None | N |
T/L | 0.1081 | likely_benign | 0.1127 | benign | -0.071 | Destabilizing | 0.345 | N | 0.346 | neutral | None | None | None | None | N |
T/M | 0.1135 | likely_benign | 0.1207 | benign | 0.009 | Stabilizing | 0.965 | D | 0.357 | neutral | None | None | None | None | N |
T/N | 0.102 | likely_benign | 0.1023 | benign | -0.302 | Destabilizing | 0.005 | N | 0.144 | neutral | N | 0.447183559 | None | None | N |
T/P | 0.0756 | likely_benign | 0.0713 | benign | -0.176 | Destabilizing | 0.001 | N | 0.219 | neutral | N | 0.429349947 | None | None | N |
T/Q | 0.2276 | likely_benign | 0.2293 | benign | -0.439 | Destabilizing | 0.561 | D | 0.365 | neutral | None | None | None | None | N |
T/R | 0.2003 | likely_benign | 0.2015 | benign | -0.232 | Destabilizing | 0.002 | N | 0.184 | neutral | None | None | None | None | N |
T/S | 0.0843 | likely_benign | 0.0852 | benign | -0.533 | Destabilizing | 0.002 | N | 0.126 | neutral | N | 0.430768525 | None | None | N |
T/V | 0.1757 | likely_benign | 0.1819 | benign | -0.176 | Destabilizing | 0.561 | D | 0.185 | neutral | None | None | None | None | N |
T/W | 0.618 | likely_pathogenic | 0.6138 | pathogenic | -0.814 | Destabilizing | 0.991 | D | 0.39 | neutral | None | None | None | None | N |
T/Y | 0.3433 | ambiguous | 0.3405 | ambiguous | -0.537 | Destabilizing | 0.965 | D | 0.379 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.