Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27723 | 83392;83393;83394 | chr2:178562965;178562964;178562963 | chr2:179427692;179427691;179427690 |
N2AB | 26082 | 78469;78470;78471 | chr2:178562965;178562964;178562963 | chr2:179427692;179427691;179427690 |
N2A | 25155 | 75688;75689;75690 | chr2:178562965;178562964;178562963 | chr2:179427692;179427691;179427690 |
N2B | 18658 | 56197;56198;56199 | chr2:178562965;178562964;178562963 | chr2:179427692;179427691;179427690 |
Novex-1 | 18783 | 56572;56573;56574 | chr2:178562965;178562964;178562963 | chr2:179427692;179427691;179427690 |
Novex-2 | 18850 | 56773;56774;56775 | chr2:178562965;178562964;178562963 | chr2:179427692;179427691;179427690 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs547706181 | -0.438 | 0.011 | N | 0.194 | 0.063 | 0.330331372229 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
E/D | rs547706181 | -0.438 | 0.011 | N | 0.194 | 0.063 | 0.330331372229 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93125E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs547706181 | -0.438 | 0.011 | N | 0.194 | 0.063 | 0.330331372229 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 1E-03 | 0 | None | None | None | 0 | None |
E/D | rs547706181 | -0.438 | 0.011 | N | 0.194 | 0.063 | 0.330331372229 | gnomAD-4.0.0 | 2.05278E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.6985E-06 | 0 | 0 |
E/K | None | None | 0.892 | D | 0.493 | 0.339 | 0.381580015636 | gnomAD-4.0.0 | 1.59157E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85863E-06 | 0 | 0 |
E/Q | rs1223945642 | -0.075 | 0.983 | N | 0.513 | 0.318 | 0.37953744168 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/Q | rs1223945642 | -0.075 | 0.983 | N | 0.513 | 0.318 | 0.37953744168 | gnomAD-4.0.0 | 3.18313E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86566E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4687 | ambiguous | 0.5126 | ambiguous | -0.628 | Destabilizing | 0.892 | D | 0.561 | neutral | N | 0.491466455 | None | None | N |
E/C | 0.9687 | likely_pathogenic | 0.9727 | pathogenic | -0.351 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
E/D | 0.1814 | likely_benign | 0.2038 | benign | -0.761 | Destabilizing | 0.011 | N | 0.194 | neutral | N | 0.472048371 | None | None | N |
E/F | 0.9518 | likely_pathogenic | 0.9584 | pathogenic | 0.06 | Stabilizing | 0.999 | D | 0.678 | prob.neutral | None | None | None | None | N |
E/G | 0.6405 | likely_pathogenic | 0.6748 | pathogenic | -0.966 | Destabilizing | 0.892 | D | 0.567 | neutral | N | 0.513813898 | None | None | N |
E/H | 0.761 | likely_pathogenic | 0.7907 | pathogenic | 0.098 | Stabilizing | 0.999 | D | 0.553 | neutral | None | None | None | None | N |
E/I | 0.7467 | likely_pathogenic | 0.7777 | pathogenic | 0.283 | Stabilizing | 0.987 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/K | 0.5722 | likely_pathogenic | 0.6244 | pathogenic | -0.132 | Destabilizing | 0.892 | D | 0.493 | neutral | D | 0.524437274 | None | None | N |
E/L | 0.7904 | likely_pathogenic | 0.8183 | pathogenic | 0.283 | Stabilizing | 0.987 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/M | 0.7863 | likely_pathogenic | 0.8102 | pathogenic | 0.469 | Stabilizing | 0.999 | D | 0.634 | neutral | None | None | None | None | N |
E/N | 0.5118 | ambiguous | 0.5607 | ambiguous | -0.764 | Destabilizing | 0.95 | D | 0.547 | neutral | None | None | None | None | N |
E/P | 0.989 | likely_pathogenic | 0.99 | pathogenic | 0.001 | Stabilizing | 0.987 | D | 0.665 | neutral | None | None | None | None | N |
E/Q | 0.3512 | ambiguous | 0.3852 | ambiguous | -0.624 | Destabilizing | 0.983 | D | 0.513 | neutral | N | 0.487605341 | None | None | N |
E/R | 0.7152 | likely_pathogenic | 0.7539 | pathogenic | 0.247 | Stabilizing | 0.987 | D | 0.601 | neutral | None | None | None | None | N |
E/S | 0.4654 | ambiguous | 0.5004 | ambiguous | -0.995 | Destabilizing | 0.916 | D | 0.492 | neutral | None | None | None | None | N |
E/T | 0.5258 | ambiguous | 0.56 | ambiguous | -0.704 | Destabilizing | 0.975 | D | 0.613 | neutral | None | None | None | None | N |
E/V | 0.5335 | ambiguous | 0.5695 | pathogenic | 0.001 | Stabilizing | 0.983 | D | 0.668 | neutral | N | 0.48811232 | None | None | N |
E/W | 0.9835 | likely_pathogenic | 0.987 | pathogenic | 0.372 | Stabilizing | 0.999 | D | 0.676 | prob.neutral | None | None | None | None | N |
E/Y | 0.9021 | likely_pathogenic | 0.9168 | pathogenic | 0.345 | Stabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.