Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27726 | 83401;83402;83403 | chr2:178562956;178562955;178562954 | chr2:179427683;179427682;179427681 |
N2AB | 26085 | 78478;78479;78480 | chr2:178562956;178562955;178562954 | chr2:179427683;179427682;179427681 |
N2A | 25158 | 75697;75698;75699 | chr2:178562956;178562955;178562954 | chr2:179427683;179427682;179427681 |
N2B | 18661 | 56206;56207;56208 | chr2:178562956;178562955;178562954 | chr2:179427683;179427682;179427681 |
Novex-1 | 18786 | 56581;56582;56583 | chr2:178562956;178562955;178562954 | chr2:179427683;179427682;179427681 |
Novex-2 | 18853 | 56782;56783;56784 | chr2:178562956;178562955;178562954 | chr2:179427683;179427682;179427681 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.003 | N | 0.197 | 0.067 | None | gnomAD-4.0.0 | 8.89541E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.16936E-05 | 0 | 0 |
S/R | rs1704233145 | None | 0.015 | N | 0.259 | 0.143 | 0.183819452728 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/R | rs1704233145 | None | 0.015 | N | 0.259 | 0.143 | 0.183819452728 | gnomAD-4.0.0 | 6.57436E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47063E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0902 | likely_benign | 0.1012 | benign | -0.228 | Destabilizing | 0.373 | N | 0.352 | neutral | None | None | None | None | N |
S/C | 0.207 | likely_benign | 0.2473 | benign | -0.315 | Destabilizing | 0.994 | D | 0.355 | neutral | N | 0.469810351 | None | None | N |
S/D | 0.3492 | ambiguous | 0.4074 | ambiguous | 0.275 | Stabilizing | 0.009 | N | 0.237 | neutral | None | None | None | None | N |
S/E | 0.5022 | ambiguous | 0.5644 | pathogenic | 0.177 | Stabilizing | 0.59 | D | 0.275 | neutral | None | None | None | None | N |
S/F | 0.4963 | ambiguous | 0.5941 | pathogenic | -0.858 | Destabilizing | 0.984 | D | 0.396 | neutral | None | None | None | None | N |
S/G | 0.0761 | likely_benign | 0.0817 | benign | -0.319 | Destabilizing | 0.003 | N | 0.197 | neutral | N | 0.414876352 | None | None | N |
S/H | 0.4216 | ambiguous | 0.4879 | ambiguous | -0.781 | Destabilizing | 0.987 | D | 0.312 | neutral | None | None | None | None | N |
S/I | 0.4333 | ambiguous | 0.5075 | ambiguous | -0.123 | Destabilizing | 0.939 | D | 0.408 | neutral | N | 0.469556861 | None | None | N |
S/K | 0.6584 | likely_pathogenic | 0.741 | pathogenic | -0.392 | Destabilizing | 0.59 | D | 0.279 | neutral | None | None | None | None | N |
S/L | 0.2156 | likely_benign | 0.2658 | benign | -0.123 | Destabilizing | 0.742 | D | 0.4 | neutral | None | None | None | None | N |
S/M | 0.3646 | ambiguous | 0.4151 | ambiguous | -0.022 | Destabilizing | 0.996 | D | 0.327 | neutral | None | None | None | None | N |
S/N | 0.1296 | likely_benign | 0.1627 | benign | -0.148 | Destabilizing | 0.521 | D | 0.312 | neutral | N | 0.453880245 | None | None | N |
S/P | 0.1013 | likely_benign | 0.1339 | benign | -0.13 | Destabilizing | 0.953 | D | 0.324 | neutral | None | None | None | None | N |
S/Q | 0.5129 | ambiguous | 0.5772 | pathogenic | -0.371 | Destabilizing | 0.91 | D | 0.311 | neutral | None | None | None | None | N |
S/R | 0.6146 | likely_pathogenic | 0.7136 | pathogenic | -0.207 | Destabilizing | 0.015 | N | 0.259 | neutral | N | 0.456933108 | None | None | N |
S/T | 0.1044 | likely_benign | 0.1218 | benign | -0.258 | Destabilizing | 0.684 | D | 0.327 | neutral | N | 0.457186598 | None | None | N |
S/V | 0.3511 | ambiguous | 0.4083 | ambiguous | -0.13 | Destabilizing | 0.953 | D | 0.402 | neutral | None | None | None | None | N |
S/W | 0.6321 | likely_pathogenic | 0.7026 | pathogenic | -0.899 | Destabilizing | 0.996 | D | 0.519 | neutral | None | None | None | None | N |
S/Y | 0.3992 | ambiguous | 0.4805 | ambiguous | -0.597 | Destabilizing | 0.984 | D | 0.396 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.