Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27729 | 83410;83411;83412 | chr2:178562947;178562946;178562945 | chr2:179427674;179427673;179427672 |
N2AB | 26088 | 78487;78488;78489 | chr2:178562947;178562946;178562945 | chr2:179427674;179427673;179427672 |
N2A | 25161 | 75706;75707;75708 | chr2:178562947;178562946;178562945 | chr2:179427674;179427673;179427672 |
N2B | 18664 | 56215;56216;56217 | chr2:178562947;178562946;178562945 | chr2:179427674;179427673;179427672 |
Novex-1 | 18789 | 56590;56591;56592 | chr2:178562947;178562946;178562945 | chr2:179427674;179427673;179427672 |
Novex-2 | 18856 | 56791;56792;56793 | chr2:178562947;178562946;178562945 | chr2:179427674;179427673;179427672 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs753299607 | 0.58 | 0.988 | N | 0.755 | 0.456 | 0.410603549233 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.6E-05 | None | 0 | None | 0 | 0 | 0 |
T/I | rs753299607 | 0.58 | 0.988 | N | 0.755 | 0.456 | 0.410603549233 | gnomAD-4.0.0 | 1.59161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77824E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.4353 | ambiguous | 0.4592 | ambiguous | -1.156 | Destabilizing | 0.067 | N | 0.502 | neutral | N | 0.484528439 | None | None | N |
T/C | 0.8581 | likely_pathogenic | 0.8665 | pathogenic | -0.776 | Destabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | N |
T/D | 0.9924 | likely_pathogenic | 0.9949 | pathogenic | -2.28 | Highly Destabilizing | 0.995 | D | 0.754 | deleterious | None | None | None | None | N |
T/E | 0.995 | likely_pathogenic | 0.9963 | pathogenic | -1.945 | Destabilizing | 0.991 | D | 0.753 | deleterious | None | None | None | None | N |
T/F | 0.9941 | likely_pathogenic | 0.995 | pathogenic | -0.66 | Destabilizing | 0.995 | D | 0.826 | deleterious | None | None | None | None | N |
T/G | 0.8617 | likely_pathogenic | 0.8712 | pathogenic | -1.597 | Destabilizing | 0.938 | D | 0.713 | prob.delet. | None | None | None | None | N |
T/H | 0.9829 | likely_pathogenic | 0.9863 | pathogenic | -1.359 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
T/I | 0.9776 | likely_pathogenic | 0.9804 | pathogenic | 0.083 | Stabilizing | 0.988 | D | 0.755 | deleterious | N | 0.477733162 | None | None | N |
T/K | 0.9941 | likely_pathogenic | 0.9955 | pathogenic | -0.073 | Destabilizing | 0.988 | D | 0.745 | deleterious | N | 0.47874712 | None | None | N |
T/L | 0.8547 | likely_pathogenic | 0.8743 | pathogenic | 0.083 | Stabilizing | 0.938 | D | 0.665 | neutral | None | None | None | None | N |
T/M | 0.7781 | likely_pathogenic | 0.809 | pathogenic | -0.474 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
T/N | 0.9263 | likely_pathogenic | 0.9465 | pathogenic | -1.303 | Destabilizing | 0.995 | D | 0.735 | prob.delet. | None | None | None | None | N |
T/P | 0.9685 | likely_pathogenic | 0.9784 | pathogenic | -0.309 | Destabilizing | 0.994 | D | 0.789 | deleterious | N | 0.505245166 | None | None | N |
T/Q | 0.9829 | likely_pathogenic | 0.9861 | pathogenic | -0.752 | Destabilizing | 0.995 | D | 0.804 | deleterious | None | None | None | None | N |
T/R | 0.9907 | likely_pathogenic | 0.9929 | pathogenic | -0.708 | Destabilizing | 0.994 | D | 0.796 | deleterious | N | 0.468022698 | None | None | N |
T/S | 0.3141 | likely_benign | 0.3059 | benign | -1.449 | Destabilizing | 0.919 | D | 0.599 | neutral | N | 0.436062488 | None | None | N |
T/V | 0.8768 | likely_pathogenic | 0.8836 | pathogenic | -0.309 | Destabilizing | 0.938 | D | 0.609 | neutral | None | None | None | None | N |
T/W | 0.9989 | likely_pathogenic | 0.9991 | pathogenic | -0.916 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
T/Y | 0.9949 | likely_pathogenic | 0.996 | pathogenic | -0.547 | Destabilizing | 0.998 | D | 0.827 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.