Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27737 | 83434;83435;83436 | chr2:178562923;178562922;178562921 | chr2:179427650;179427649;179427648 |
N2AB | 26096 | 78511;78512;78513 | chr2:178562923;178562922;178562921 | chr2:179427650;179427649;179427648 |
N2A | 25169 | 75730;75731;75732 | chr2:178562923;178562922;178562921 | chr2:179427650;179427649;179427648 |
N2B | 18672 | 56239;56240;56241 | chr2:178562923;178562922;178562921 | chr2:179427650;179427649;179427648 |
Novex-1 | 18797 | 56614;56615;56616 | chr2:178562923;178562922;178562921 | chr2:179427650;179427649;179427648 |
Novex-2 | 18864 | 56815;56816;56817 | chr2:178562923;178562922;178562921 | chr2:179427650;179427649;179427648 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs764871079 | -0.783 | 0.166 | N | 0.254 | 0.16 | 0.240491677333 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.68161E-04 | None | 0 | None | 0 | 0 | 1.66058E-04 |
T/A | rs764871079 | -0.783 | 0.166 | N | 0.254 | 0.16 | 0.240491677333 | gnomAD-4.0.0 | 7.95874E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.11235E-04 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
T/N | None | None | None | N | 0.136 | 0.125 | 0.238705975628 | gnomAD-4.0.0 | 1.59178E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85876E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.154 | likely_benign | 0.1623 | benign | -1.186 | Destabilizing | 0.166 | N | 0.254 | neutral | N | 0.512817558 | None | None | I |
T/C | 0.4708 | ambiguous | 0.4682 | ambiguous | -0.797 | Destabilizing | 0.991 | D | 0.423 | neutral | None | None | None | None | I |
T/D | 0.259 | likely_benign | 0.2415 | benign | -0.559 | Destabilizing | 0.001 | N | 0.147 | neutral | None | None | None | None | I |
T/E | 0.4819 | ambiguous | 0.5048 | ambiguous | -0.529 | Destabilizing | 0.209 | N | 0.429 | neutral | None | None | None | None | I |
T/F | 0.5633 | ambiguous | 0.5728 | pathogenic | -1.291 | Destabilizing | 0.901 | D | 0.439 | neutral | None | None | None | None | I |
T/G | 0.2039 | likely_benign | 0.199 | benign | -1.453 | Destabilizing | 0.209 | N | 0.361 | neutral | None | None | None | None | I |
T/H | 0.3126 | likely_benign | 0.3078 | benign | -1.71 | Destabilizing | 0.901 | D | 0.437 | neutral | None | None | None | None | I |
T/I | 0.5679 | likely_pathogenic | 0.5745 | pathogenic | -0.548 | Destabilizing | 0.662 | D | 0.494 | neutral | N | 0.486239442 | None | None | I |
T/K | 0.3938 | ambiguous | 0.4214 | ambiguous | -0.783 | Destabilizing | 0.345 | N | 0.421 | neutral | None | None | None | None | I |
T/L | 0.1914 | likely_benign | 0.1977 | benign | -0.548 | Destabilizing | 0.561 | D | 0.412 | neutral | None | None | None | None | I |
T/M | 0.167 | likely_benign | 0.173 | benign | -0.166 | Destabilizing | 0.965 | D | 0.433 | neutral | None | None | None | None | I |
T/N | 0.0602 | likely_benign | 0.0531 | benign | -0.848 | Destabilizing | None | N | 0.136 | neutral | N | 0.414770936 | None | None | I |
T/P | 0.5041 | ambiguous | 0.5097 | ambiguous | -0.731 | Destabilizing | 0.662 | D | 0.474 | neutral | N | 0.509205542 | None | None | I |
T/Q | 0.3304 | likely_benign | 0.3448 | ambiguous | -1.034 | Destabilizing | 0.561 | D | 0.473 | neutral | None | None | None | None | I |
T/R | 0.3804 | ambiguous | 0.4126 | ambiguous | -0.57 | Destabilizing | 0.561 | D | 0.435 | neutral | None | None | None | None | I |
T/S | 0.0783 | likely_benign | 0.0733 | benign | -1.178 | Destabilizing | 0.005 | N | 0.173 | neutral | N | 0.477627549 | None | None | I |
T/V | 0.3982 | ambiguous | 0.4034 | ambiguous | -0.731 | Destabilizing | 0.561 | D | 0.227 | neutral | None | None | None | None | I |
T/W | 0.8382 | likely_pathogenic | 0.842 | pathogenic | -1.177 | Destabilizing | 0.991 | D | 0.451 | neutral | None | None | None | None | I |
T/Y | 0.4953 | ambiguous | 0.4936 | ambiguous | -0.936 | Destabilizing | 0.965 | D | 0.437 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.