Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27738 | 83437;83438;83439 | chr2:178562920;178562919;178562918 | chr2:179427647;179427646;179427645 |
N2AB | 26097 | 78514;78515;78516 | chr2:178562920;178562919;178562918 | chr2:179427647;179427646;179427645 |
N2A | 25170 | 75733;75734;75735 | chr2:178562920;178562919;178562918 | chr2:179427647;179427646;179427645 |
N2B | 18673 | 56242;56243;56244 | chr2:178562920;178562919;178562918 | chr2:179427647;179427646;179427645 |
Novex-1 | 18798 | 56617;56618;56619 | chr2:178562920;178562919;178562918 | chr2:179427647;179427646;179427645 |
Novex-2 | 18865 | 56818;56819;56820 | chr2:178562920;178562919;178562918 | chr2:179427647;179427646;179427645 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 1.0 | N | 0.593 | 0.413 | 0.340753184043 | gnomAD-4.0.0 | 6.84305E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99518E-07 | 0 | 0 |
R/K | None | None | 0.997 | N | 0.546 | 0.362 | 0.298745278005 | gnomAD-4.0.0 | 1.59179E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43279E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9837 | likely_pathogenic | 0.9872 | pathogenic | -0.145 | Destabilizing | 0.999 | D | 0.604 | neutral | None | None | None | None | I |
R/C | 0.8825 | likely_pathogenic | 0.8875 | pathogenic | -0.244 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | I |
R/D | 0.997 | likely_pathogenic | 0.9976 | pathogenic | -0.023 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
R/E | 0.9826 | likely_pathogenic | 0.9861 | pathogenic | 0.066 | Stabilizing | 0.999 | D | 0.646 | neutral | None | None | None | None | I |
R/F | 0.9957 | likely_pathogenic | 0.9961 | pathogenic | -0.312 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
R/G | 0.981 | likely_pathogenic | 0.9836 | pathogenic | -0.37 | Destabilizing | 1.0 | D | 0.593 | neutral | N | 0.508727886 | None | None | I |
R/H | 0.7794 | likely_pathogenic | 0.7891 | pathogenic | -1.008 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | I |
R/I | 0.9705 | likely_pathogenic | 0.9745 | pathogenic | 0.421 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | N | 0.492318698 | None | None | I |
R/K | 0.6745 | likely_pathogenic | 0.7014 | pathogenic | -0.142 | Destabilizing | 0.997 | D | 0.546 | neutral | N | 0.459375417 | None | None | I |
R/L | 0.9585 | likely_pathogenic | 0.9641 | pathogenic | 0.421 | Stabilizing | 1.0 | D | 0.593 | neutral | None | None | None | None | I |
R/M | 0.9865 | likely_pathogenic | 0.9886 | pathogenic | -0.056 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
R/N | 0.9923 | likely_pathogenic | 0.9937 | pathogenic | 0.068 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
R/P | 0.9794 | likely_pathogenic | 0.9827 | pathogenic | 0.253 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
R/Q | 0.7887 | likely_pathogenic | 0.7988 | pathogenic | 0.009 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
R/S | 0.9901 | likely_pathogenic | 0.992 | pathogenic | -0.337 | Destabilizing | 1.0 | D | 0.646 | neutral | N | 0.475366532 | None | None | I |
R/T | 0.9878 | likely_pathogenic | 0.9904 | pathogenic | -0.093 | Destabilizing | 1.0 | D | 0.641 | neutral | N | 0.473226938 | None | None | I |
R/V | 0.9745 | likely_pathogenic | 0.9789 | pathogenic | 0.253 | Stabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | I |
R/W | 0.9402 | likely_pathogenic | 0.9378 | pathogenic | -0.331 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
R/Y | 0.9771 | likely_pathogenic | 0.9786 | pathogenic | 0.071 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.