Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27746 | 83461;83462;83463 | chr2:178562896;178562895;178562894 | chr2:179427623;179427622;179427621 |
N2AB | 26105 | 78538;78539;78540 | chr2:178562896;178562895;178562894 | chr2:179427623;179427622;179427621 |
N2A | 25178 | 75757;75758;75759 | chr2:178562896;178562895;178562894 | chr2:179427623;179427622;179427621 |
N2B | 18681 | 56266;56267;56268 | chr2:178562896;178562895;178562894 | chr2:179427623;179427622;179427621 |
Novex-1 | 18806 | 56641;56642;56643 | chr2:178562896;178562895;178562894 | chr2:179427623;179427622;179427621 |
Novex-2 | 18873 | 56842;56843;56844 | chr2:178562896;178562895;178562894 | chr2:179427623;179427622;179427621 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs1018294368 | -1.156 | 0.767 | N | 0.401 | 0.128 | 0.300784259202 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
L/V | rs1018294368 | -1.156 | 0.767 | N | 0.401 | 0.128 | 0.300784259202 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/V | rs1018294368 | -1.156 | 0.767 | N | 0.401 | 0.128 | 0.300784259202 | gnomAD-4.0.0 | 6.57479E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47033E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9607 | likely_pathogenic | 0.9586 | pathogenic | -2.557 | Highly Destabilizing | 0.997 | D | 0.779 | deleterious | None | None | None | None | N |
L/C | 0.9097 | likely_pathogenic | 0.9075 | pathogenic | -2.033 | Highly Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
L/D | 0.9999 | likely_pathogenic | 0.9999 | pathogenic | -2.851 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/E | 0.999 | likely_pathogenic | 0.999 | pathogenic | -2.638 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
L/F | 0.9075 | likely_pathogenic | 0.8826 | pathogenic | -1.604 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
L/G | 0.9963 | likely_pathogenic | 0.9964 | pathogenic | -3.109 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
L/H | 0.9976 | likely_pathogenic | 0.9976 | pathogenic | -2.554 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
L/I | 0.1832 | likely_benign | 0.179 | benign | -0.969 | Destabilizing | 0.985 | D | 0.688 | prob.neutral | None | None | None | None | N |
L/K | 0.9977 | likely_pathogenic | 0.998 | pathogenic | -1.939 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
L/M | 0.4412 | ambiguous | 0.4249 | ambiguous | -0.972 | Destabilizing | 0.999 | D | 0.76 | deleterious | N | 0.466594347 | None | None | N |
L/N | 0.9987 | likely_pathogenic | 0.9989 | pathogenic | -2.267 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/P | 0.9991 | likely_pathogenic | 0.9992 | pathogenic | -1.478 | Destabilizing | 1.0 | D | 0.901 | deleterious | N | 0.505120262 | None | None | N |
L/Q | 0.9955 | likely_pathogenic | 0.9959 | pathogenic | -2.156 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | N | 0.505120262 | None | None | N |
L/R | 0.9949 | likely_pathogenic | 0.9957 | pathogenic | -1.628 | Destabilizing | 1.0 | D | 0.896 | deleterious | N | 0.505120262 | None | None | N |
L/S | 0.9978 | likely_pathogenic | 0.9976 | pathogenic | -2.995 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
L/T | 0.9831 | likely_pathogenic | 0.9823 | pathogenic | -2.628 | Highly Destabilizing | 0.999 | D | 0.85 | deleterious | None | None | None | None | N |
L/V | 0.191 | likely_benign | 0.1935 | benign | -1.478 | Destabilizing | 0.767 | D | 0.401 | neutral | N | 0.462979731 | None | None | N |
L/W | 0.9964 | likely_pathogenic | 0.996 | pathogenic | -1.975 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
L/Y | 0.9941 | likely_pathogenic | 0.9933 | pathogenic | -1.688 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.