Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27749 | 83470;83471;83472 | chr2:178562887;178562886;178562885 | chr2:179427614;179427613;179427612 |
N2AB | 26108 | 78547;78548;78549 | chr2:178562887;178562886;178562885 | chr2:179427614;179427613;179427612 |
N2A | 25181 | 75766;75767;75768 | chr2:178562887;178562886;178562885 | chr2:179427614;179427613;179427612 |
N2B | 18684 | 56275;56276;56277 | chr2:178562887;178562886;178562885 | chr2:179427614;179427613;179427612 |
Novex-1 | 18809 | 56650;56651;56652 | chr2:178562887;178562886;178562885 | chr2:179427614;179427613;179427612 |
Novex-2 | 18876 | 56851;56852;56853 | chr2:178562887;178562886;178562885 | chr2:179427614;179427613;179427612 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.822 | N | 0.68 | 0.506 | 0.522770035047 | gnomAD-4.0.0 | 1.59228E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85914E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2168 | likely_benign | 0.2071 | benign | -0.452 | Destabilizing | 0.698 | D | 0.593 | neutral | N | 0.498405442 | None | None | N |
E/C | 0.8223 | likely_pathogenic | 0.8119 | pathogenic | 0.23 | Stabilizing | 0.998 | D | 0.791 | deleterious | None | None | None | None | N |
E/D | 0.3913 | ambiguous | 0.3911 | ambiguous | -0.459 | Destabilizing | 0.014 | N | 0.324 | neutral | N | 0.513244467 | None | None | N |
E/F | 0.8569 | likely_pathogenic | 0.8393 | pathogenic | -0.682 | Destabilizing | 0.956 | D | 0.792 | deleterious | None | None | None | None | N |
E/G | 0.3478 | ambiguous | 0.3302 | benign | -0.646 | Destabilizing | 0.822 | D | 0.68 | prob.neutral | N | 0.514004936 | None | None | N |
E/H | 0.5104 | ambiguous | 0.5 | ambiguous | -0.839 | Destabilizing | 0.998 | D | 0.664 | neutral | None | None | None | None | N |
E/I | 0.3504 | ambiguous | 0.3376 | benign | 0.026 | Stabilizing | 0.915 | D | 0.718 | prob.delet. | None | None | None | None | N |
E/K | 0.1913 | likely_benign | 0.1685 | benign | 0.385 | Stabilizing | 0.822 | D | 0.631 | neutral | N | 0.506371588 | None | None | N |
E/L | 0.5112 | ambiguous | 0.4949 | ambiguous | 0.026 | Stabilizing | 0.754 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/M | 0.4865 | ambiguous | 0.4719 | ambiguous | 0.427 | Stabilizing | 0.994 | D | 0.769 | deleterious | None | None | None | None | N |
E/N | 0.4494 | ambiguous | 0.4298 | ambiguous | 0.174 | Stabilizing | 0.915 | D | 0.645 | neutral | None | None | None | None | N |
E/P | 0.9884 | likely_pathogenic | 0.9902 | pathogenic | -0.114 | Destabilizing | 0.978 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/Q | 0.1009 | likely_benign | 0.097 | benign | 0.172 | Stabilizing | 0.942 | D | 0.633 | neutral | N | 0.487138042 | None | None | N |
E/R | 0.308 | likely_benign | 0.2848 | benign | 0.296 | Stabilizing | 0.978 | D | 0.668 | neutral | None | None | None | None | N |
E/S | 0.2706 | likely_benign | 0.2561 | benign | 0.007 | Stabilizing | 0.86 | D | 0.623 | neutral | None | None | None | None | N |
E/T | 0.2071 | likely_benign | 0.1915 | benign | 0.168 | Stabilizing | 0.86 | D | 0.642 | neutral | None | None | None | None | N |
E/V | 0.1905 | likely_benign | 0.1856 | benign | -0.114 | Destabilizing | 0.032 | N | 0.492 | neutral | N | 0.492417961 | None | None | N |
E/W | 0.9437 | likely_pathogenic | 0.9398 | pathogenic | -0.627 | Destabilizing | 0.998 | D | 0.747 | deleterious | None | None | None | None | N |
E/Y | 0.7952 | likely_pathogenic | 0.7802 | pathogenic | -0.449 | Destabilizing | 0.978 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.