Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27751 | 83476;83477;83478 | chr2:178562881;178562880;178562879 | chr2:179427608;179427607;179427606 |
N2AB | 26110 | 78553;78554;78555 | chr2:178562881;178562880;178562879 | chr2:179427608;179427607;179427606 |
N2A | 25183 | 75772;75773;75774 | chr2:178562881;178562880;178562879 | chr2:179427608;179427607;179427606 |
N2B | 18686 | 56281;56282;56283 | chr2:178562881;178562880;178562879 | chr2:179427608;179427607;179427606 |
Novex-1 | 18811 | 56656;56657;56658 | chr2:178562881;178562880;178562879 | chr2:179427608;179427607;179427606 |
Novex-2 | 18878 | 56857;56858;56859 | chr2:178562881;178562880;178562879 | chr2:179427608;179427607;179427606 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs775527437 | 0.372 | 0.007 | N | 0.097 | 0.111 | 0.0611884634855 | gnomAD-2.1.1 | 8.08E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 1.66611E-04 |
N/S | rs775527437 | 0.372 | 0.007 | N | 0.097 | 0.111 | 0.0611884634855 | gnomAD-4.0.0 | 4.77742E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57824E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1278 | likely_benign | 0.1199 | benign | -0.165 | Destabilizing | 0.25 | N | 0.419 | neutral | None | None | None | None | N |
N/C | 0.1879 | likely_benign | 0.1727 | benign | 0.17 | Stabilizing | 0.992 | D | 0.362 | neutral | None | None | None | None | N |
N/D | 0.1413 | likely_benign | 0.1328 | benign | -0.016 | Destabilizing | 0.549 | D | 0.362 | neutral | N | 0.439301234 | None | None | N |
N/E | 0.288 | likely_benign | 0.2736 | benign | -0.088 | Destabilizing | 0.617 | D | 0.313 | neutral | None | None | None | None | N |
N/F | 0.4179 | ambiguous | 0.4145 | ambiguous | -0.799 | Destabilizing | 0.85 | D | 0.379 | neutral | None | None | None | None | N |
N/G | 0.1833 | likely_benign | 0.1728 | benign | -0.234 | Destabilizing | 0.25 | N | 0.345 | neutral | None | None | None | None | N |
N/H | 0.0933 | likely_benign | 0.0922 | benign | -0.306 | Destabilizing | 0.896 | D | 0.323 | neutral | N | 0.487036466 | None | None | N |
N/I | 0.1161 | likely_benign | 0.1205 | benign | -0.083 | Destabilizing | 0.379 | N | 0.391 | neutral | N | 0.447267356 | None | None | N |
N/K | 0.1862 | likely_benign | 0.1718 | benign | 0.105 | Stabilizing | 0.379 | N | 0.31 | neutral | N | 0.380444932 | None | None | N |
N/L | 0.1455 | likely_benign | 0.1422 | benign | -0.083 | Destabilizing | 0.002 | N | 0.179 | neutral | None | None | None | None | N |
N/M | 0.2528 | likely_benign | 0.2462 | benign | 0.113 | Stabilizing | 0.85 | D | 0.373 | neutral | None | None | None | None | N |
N/P | 0.2257 | likely_benign | 0.2278 | benign | -0.09 | Destabilizing | 0.005 | N | 0.221 | neutral | None | None | None | None | N |
N/Q | 0.2161 | likely_benign | 0.207 | benign | -0.265 | Destabilizing | 0.85 | D | 0.315 | neutral | None | None | None | None | N |
N/R | 0.2124 | likely_benign | 0.2025 | benign | 0.171 | Stabilizing | 0.617 | D | 0.318 | neutral | None | None | None | None | N |
N/S | 0.0625 | likely_benign | 0.0634 | benign | -0.02 | Destabilizing | 0.007 | N | 0.097 | neutral | N | 0.345868211 | None | None | N |
N/T | 0.0872 | likely_benign | 0.085 | benign | 0.011 | Stabilizing | 0.201 | N | 0.334 | neutral | N | 0.413712143 | None | None | N |
N/V | 0.1215 | likely_benign | 0.1216 | benign | -0.09 | Destabilizing | 0.447 | N | 0.397 | neutral | None | None | None | None | N |
N/W | 0.7386 | likely_pathogenic | 0.7404 | pathogenic | -0.932 | Destabilizing | 0.992 | D | 0.435 | neutral | None | None | None | None | N |
N/Y | 0.1667 | likely_benign | 0.165 | benign | -0.613 | Destabilizing | 0.963 | D | 0.385 | neutral | N | 0.468181346 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.