Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27754 | 83485;83486;83487 | chr2:178562872;178562871;178562870 | chr2:179427599;179427598;179427597 |
N2AB | 26113 | 78562;78563;78564 | chr2:178562872;178562871;178562870 | chr2:179427599;179427598;179427597 |
N2A | 25186 | 75781;75782;75783 | chr2:178562872;178562871;178562870 | chr2:179427599;179427598;179427597 |
N2B | 18689 | 56290;56291;56292 | chr2:178562872;178562871;178562870 | chr2:179427599;179427598;179427597 |
Novex-1 | 18814 | 56665;56666;56667 | chr2:178562872;178562871;178562870 | chr2:179427599;179427598;179427597 |
Novex-2 | 18881 | 56866;56867;56868 | chr2:178562872;178562871;178562870 | chr2:179427599;179427598;179427597 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs1383167179 | None | 0.99 | N | 0.662 | 0.399 | 0.677844904838 | gnomAD-4.0.0 | 1.59294E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88558E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0811 | likely_benign | 0.0812 | benign | -0.267 | Destabilizing | 0.656 | D | 0.445 | neutral | N | 0.483010211 | None | None | N |
S/C | 0.0796 | likely_benign | 0.0749 | benign | -0.2 | Destabilizing | 0.997 | D | 0.573 | neutral | D | 0.530881423 | None | None | N |
S/D | 0.4987 | ambiguous | 0.4717 | ambiguous | 0.073 | Stabilizing | 0.754 | D | 0.425 | neutral | None | None | None | None | N |
S/E | 0.4071 | ambiguous | 0.3829 | ambiguous | -0.039 | Destabilizing | 0.019 | N | 0.239 | neutral | None | None | None | None | N |
S/F | 0.2116 | likely_benign | 0.205 | benign | -0.987 | Destabilizing | 0.99 | D | 0.662 | neutral | N | 0.49138123 | None | None | N |
S/G | 0.1099 | likely_benign | 0.1087 | benign | -0.329 | Destabilizing | 0.86 | D | 0.397 | neutral | None | None | None | None | N |
S/H | 0.2352 | likely_benign | 0.2208 | benign | -0.869 | Destabilizing | 0.994 | D | 0.535 | neutral | None | None | None | None | N |
S/I | 0.1231 | likely_benign | 0.1175 | benign | -0.238 | Destabilizing | 0.978 | D | 0.655 | neutral | None | None | None | None | N |
S/K | 0.3013 | likely_benign | 0.2592 | benign | -0.338 | Destabilizing | 0.008 | N | 0.202 | neutral | None | None | None | None | N |
S/L | 0.0961 | likely_benign | 0.0979 | benign | -0.238 | Destabilizing | 0.86 | D | 0.613 | neutral | None | None | None | None | N |
S/M | 0.1393 | likely_benign | 0.1393 | benign | 0.041 | Stabilizing | 0.998 | D | 0.536 | neutral | None | None | None | None | N |
S/N | 0.1184 | likely_benign | 0.1134 | benign | -0.045 | Destabilizing | 0.86 | D | 0.467 | neutral | None | None | None | None | N |
S/P | 0.6442 | likely_pathogenic | 0.6318 | pathogenic | -0.223 | Destabilizing | 0.97 | D | 0.498 | neutral | N | 0.519107044 | None | None | N |
S/Q | 0.2578 | likely_benign | 0.2435 | benign | -0.332 | Destabilizing | 0.915 | D | 0.424 | neutral | None | None | None | None | N |
S/R | 0.2896 | likely_benign | 0.25 | benign | -0.141 | Destabilizing | 0.754 | D | 0.487 | neutral | None | None | None | None | N |
S/T | 0.0649 | likely_benign | 0.0635 | benign | -0.16 | Destabilizing | 0.822 | D | 0.456 | neutral | N | 0.465469115 | None | None | N |
S/V | 0.1256 | likely_benign | 0.1228 | benign | -0.223 | Destabilizing | 0.978 | D | 0.608 | neutral | None | None | None | None | N |
S/W | 0.4002 | ambiguous | 0.3877 | ambiguous | -1.019 | Destabilizing | 0.998 | D | 0.703 | prob.neutral | None | None | None | None | N |
S/Y | 0.2017 | likely_benign | 0.1926 | benign | -0.72 | Destabilizing | 0.99 | D | 0.662 | neutral | N | 0.501002789 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.