Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27757 | 83494;83495;83496 | chr2:178562863;178562862;178562861 | chr2:179427590;179427589;179427588 |
N2AB | 26116 | 78571;78572;78573 | chr2:178562863;178562862;178562861 | chr2:179427590;179427589;179427588 |
N2A | 25189 | 75790;75791;75792 | chr2:178562863;178562862;178562861 | chr2:179427590;179427589;179427588 |
N2B | 18692 | 56299;56300;56301 | chr2:178562863;178562862;178562861 | chr2:179427590;179427589;179427588 |
Novex-1 | 18817 | 56674;56675;56676 | chr2:178562863;178562862;178562861 | chr2:179427590;179427589;179427588 |
Novex-2 | 18884 | 56875;56876;56877 | chr2:178562863;178562862;178562861 | chr2:179427590;179427589;179427588 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.085 | N | 0.391 | 0.218 | 0.324436698001 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7323 | likely_pathogenic | 0.7158 | pathogenic | -0.768 | Destabilizing | 0.999 | D | 0.78 | deleterious | None | None | None | None | N |
A/D | 0.9712 | likely_pathogenic | 0.9739 | pathogenic | -0.504 | Destabilizing | 0.996 | D | 0.877 | deleterious | D | 0.543327365 | None | None | N |
A/E | 0.9585 | likely_pathogenic | 0.9589 | pathogenic | -0.523 | Destabilizing | 0.992 | D | 0.855 | deleterious | None | None | None | None | N |
A/F | 0.8461 | likely_pathogenic | 0.8252 | pathogenic | -0.691 | Destabilizing | 0.983 | D | 0.893 | deleterious | None | None | None | None | N |
A/G | 0.4364 | ambiguous | 0.4312 | ambiguous | -0.858 | Destabilizing | 0.963 | D | 0.613 | neutral | N | 0.515842007 | None | None | N |
A/H | 0.9594 | likely_pathogenic | 0.961 | pathogenic | -0.878 | Destabilizing | 0.999 | D | 0.873 | deleterious | None | None | None | None | N |
A/I | 0.6384 | likely_pathogenic | 0.5979 | pathogenic | -0.076 | Destabilizing | 0.745 | D | 0.755 | deleterious | None | None | None | None | N |
A/K | 0.9799 | likely_pathogenic | 0.9828 | pathogenic | -0.841 | Destabilizing | 0.992 | D | 0.856 | deleterious | None | None | None | None | N |
A/L | 0.5888 | likely_pathogenic | 0.5709 | pathogenic | -0.076 | Destabilizing | 0.895 | D | 0.596 | neutral | None | None | None | None | N |
A/M | 0.6658 | likely_pathogenic | 0.6342 | pathogenic | -0.224 | Destabilizing | 0.996 | D | 0.845 | deleterious | None | None | None | None | N |
A/N | 0.9069 | likely_pathogenic | 0.9092 | pathogenic | -0.645 | Destabilizing | 0.997 | D | 0.892 | deleterious | None | None | None | None | N |
A/P | 0.9859 | likely_pathogenic | 0.9898 | pathogenic | -0.21 | Destabilizing | 0.996 | D | 0.867 | deleterious | D | 0.544341323 | None | None | N |
A/Q | 0.9223 | likely_pathogenic | 0.9241 | pathogenic | -0.737 | Destabilizing | 0.997 | D | 0.867 | deleterious | None | None | None | None | N |
A/R | 0.9534 | likely_pathogenic | 0.9599 | pathogenic | -0.559 | Destabilizing | 0.992 | D | 0.869 | deleterious | None | None | None | None | N |
A/S | 0.2723 | likely_benign | 0.2722 | benign | -1.043 | Destabilizing | 0.928 | D | 0.623 | neutral | N | 0.512684272 | None | None | N |
A/T | 0.3149 | likely_benign | 0.2966 | benign | -0.946 | Destabilizing | 0.928 | D | 0.703 | prob.neutral | N | 0.492431187 | None | None | N |
A/V | 0.3375 | likely_benign | 0.318 | benign | -0.21 | Destabilizing | 0.085 | N | 0.391 | neutral | N | 0.503758144 | None | None | N |
A/W | 0.9853 | likely_pathogenic | 0.9847 | pathogenic | -1.016 | Destabilizing | 0.999 | D | 0.852 | deleterious | None | None | None | None | N |
A/Y | 0.9276 | likely_pathogenic | 0.9247 | pathogenic | -0.579 | Destabilizing | 0.992 | D | 0.892 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.