Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27759 | 83500;83501;83502 | chr2:178562857;178562856;178562855 | chr2:179427584;179427583;179427582 |
N2AB | 26118 | 78577;78578;78579 | chr2:178562857;178562856;178562855 | chr2:179427584;179427583;179427582 |
N2A | 25191 | 75796;75797;75798 | chr2:178562857;178562856;178562855 | chr2:179427584;179427583;179427582 |
N2B | 18694 | 56305;56306;56307 | chr2:178562857;178562856;178562855 | chr2:179427584;179427583;179427582 |
Novex-1 | 18819 | 56680;56681;56682 | chr2:178562857;178562856;178562855 | chr2:179427584;179427583;179427582 |
Novex-2 | 18886 | 56881;56882;56883 | chr2:178562857;178562856;178562855 | chr2:179427584;179427583;179427582 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs749582041 | -0.345 | 0.046 | N | 0.21 | 0.157 | None | gnomAD-2.1.1 | 1.08E-05 | None | None | None | None | N | None | 8.33E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.41683E-04 |
V/I | rs749582041 | -0.345 | 0.046 | N | 0.21 | 0.157 | None | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 1.2075E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs749582041 | -0.345 | 0.046 | N | 0.21 | 0.157 | None | gnomAD-4.0.0 | 4.96027E-06 | None | None | None | None | N | None | 1.06855E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8978 | likely_pathogenic | 0.9185 | pathogenic | -1.735 | Destabilizing | 0.939 | D | 0.519 | neutral | N | 0.491627358 | None | None | N |
V/C | 0.9231 | likely_pathogenic | 0.9334 | pathogenic | -1.227 | Destabilizing | 0.999 | D | 0.778 | deleterious | None | None | None | None | N |
V/D | 0.9985 | likely_pathogenic | 0.999 | pathogenic | -2.468 | Highly Destabilizing | 0.997 | D | 0.841 | deleterious | D | 0.529199583 | None | None | N |
V/E | 0.9956 | likely_pathogenic | 0.9968 | pathogenic | -2.145 | Highly Destabilizing | 0.998 | D | 0.801 | deleterious | None | None | None | None | N |
V/F | 0.8068 | likely_pathogenic | 0.8419 | pathogenic | -0.924 | Destabilizing | 0.982 | D | 0.787 | deleterious | D | 0.536081207 | None | None | N |
V/G | 0.9568 | likely_pathogenic | 0.9661 | pathogenic | -2.37 | Highly Destabilizing | 0.997 | D | 0.821 | deleterious | N | 0.510841838 | None | None | N |
V/H | 0.9973 | likely_pathogenic | 0.998 | pathogenic | -2.413 | Highly Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
V/I | 0.0964 | likely_benign | 0.0973 | benign | 0.09 | Stabilizing | 0.046 | N | 0.21 | neutral | N | 0.457657708 | None | None | N |
V/K | 0.9953 | likely_pathogenic | 0.9965 | pathogenic | -1.263 | Destabilizing | 0.993 | D | 0.805 | deleterious | None | None | None | None | N |
V/L | 0.6315 | likely_pathogenic | 0.6901 | pathogenic | 0.09 | Stabilizing | 0.76 | D | 0.471 | neutral | N | 0.511220047 | None | None | N |
V/M | 0.758 | likely_pathogenic | 0.7981 | pathogenic | -0.166 | Destabilizing | 0.986 | D | 0.712 | prob.delet. | None | None | None | None | N |
V/N | 0.9931 | likely_pathogenic | 0.9947 | pathogenic | -1.896 | Destabilizing | 0.998 | D | 0.855 | deleterious | None | None | None | None | N |
V/P | 0.9952 | likely_pathogenic | 0.9969 | pathogenic | -0.495 | Destabilizing | 0.998 | D | 0.821 | deleterious | None | None | None | None | N |
V/Q | 0.9914 | likely_pathogenic | 0.9933 | pathogenic | -1.502 | Destabilizing | 0.998 | D | 0.828 | deleterious | None | None | None | None | N |
V/R | 0.988 | likely_pathogenic | 0.9906 | pathogenic | -1.571 | Destabilizing | 0.998 | D | 0.856 | deleterious | None | None | None | None | N |
V/S | 0.9691 | likely_pathogenic | 0.9759 | pathogenic | -2.482 | Highly Destabilizing | 0.993 | D | 0.796 | deleterious | None | None | None | None | N |
V/T | 0.922 | likely_pathogenic | 0.9366 | pathogenic | -1.977 | Destabilizing | 0.953 | D | 0.629 | neutral | None | None | None | None | N |
V/W | 0.9966 | likely_pathogenic | 0.9973 | pathogenic | -1.498 | Destabilizing | 0.999 | D | 0.826 | deleterious | None | None | None | None | N |
V/Y | 0.9879 | likely_pathogenic | 0.9912 | pathogenic | -1.057 | Destabilizing | 0.998 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.