Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27766 | 83521;83522;83523 | chr2:178562836;178562835;178562834 | chr2:179427563;179427562;179427561 |
N2AB | 26125 | 78598;78599;78600 | chr2:178562836;178562835;178562834 | chr2:179427563;179427562;179427561 |
N2A | 25198 | 75817;75818;75819 | chr2:178562836;178562835;178562834 | chr2:179427563;179427562;179427561 |
N2B | 18701 | 56326;56327;56328 | chr2:178562836;178562835;178562834 | chr2:179427563;179427562;179427561 |
Novex-1 | 18826 | 56701;56702;56703 | chr2:178562836;178562835;178562834 | chr2:179427563;179427562;179427561 |
Novex-2 | 18893 | 56902;56903;56904 | chr2:178562836;178562835;178562834 | chr2:179427563;179427562;179427561 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 0.518 | N | 0.593 | 0.372 | 0.382925413656 | gnomAD-4.0.0 | 1.36915E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79942E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1917 | likely_benign | 0.1733 | benign | -0.852 | Destabilizing | 0.307 | N | 0.441 | neutral | N | 0.440756232 | None | None | I |
S/C | 0.2582 | likely_benign | 0.2319 | benign | -0.544 | Destabilizing | 0.996 | D | 0.589 | neutral | None | None | None | None | I |
S/D | 0.9484 | likely_pathogenic | 0.9504 | pathogenic | 0.015 | Stabilizing | 0.74 | D | 0.498 | neutral | None | None | None | None | I |
S/E | 0.9499 | likely_pathogenic | 0.9526 | pathogenic | -0.055 | Destabilizing | 0.74 | D | 0.495 | neutral | None | None | None | None | I |
S/F | 0.7431 | likely_pathogenic | 0.7276 | pathogenic | -1.371 | Destabilizing | 0.953 | D | 0.759 | deleterious | None | None | None | None | I |
S/G | 0.2895 | likely_benign | 0.2605 | benign | -0.977 | Destabilizing | 0.74 | D | 0.369 | neutral | None | None | None | None | I |
S/H | 0.8395 | likely_pathogenic | 0.8369 | pathogenic | -1.488 | Destabilizing | 0.987 | D | 0.537 | neutral | None | None | None | None | I |
S/I | 0.5558 | ambiguous | 0.532 | ambiguous | -0.635 | Destabilizing | 0.909 | D | 0.745 | deleterious | None | None | None | None | I |
S/K | 0.9706 | likely_pathogenic | 0.9689 | pathogenic | -0.525 | Destabilizing | 0.587 | D | 0.401 | neutral | None | None | None | None | I |
S/L | 0.3235 | likely_benign | 0.298 | benign | -0.635 | Destabilizing | 0.518 | D | 0.593 | neutral | N | 0.446951485 | None | None | I |
S/M | 0.4312 | ambiguous | 0.405 | ambiguous | -0.183 | Destabilizing | 0.996 | D | 0.54 | neutral | None | None | None | None | I |
S/N | 0.5877 | likely_pathogenic | 0.5697 | pathogenic | -0.287 | Destabilizing | 0.74 | D | 0.545 | neutral | None | None | None | None | I |
S/P | 0.6746 | likely_pathogenic | 0.6412 | pathogenic | -0.681 | Destabilizing | 0.938 | D | 0.543 | neutral | N | 0.430421808 | None | None | I |
S/Q | 0.9024 | likely_pathogenic | 0.8993 | pathogenic | -0.63 | Destabilizing | 0.909 | D | 0.458 | neutral | None | None | None | None | I |
S/R | 0.9608 | likely_pathogenic | 0.9568 | pathogenic | -0.319 | Destabilizing | 0.02 | N | 0.311 | neutral | None | None | None | None | I |
S/T | 0.0819 | likely_benign | 0.0717 | benign | -0.471 | Destabilizing | 0.028 | N | 0.198 | neutral | N | 0.368434774 | None | None | I |
S/V | 0.4608 | ambiguous | 0.4273 | ambiguous | -0.681 | Destabilizing | 0.833 | D | 0.571 | neutral | None | None | None | None | I |
S/W | 0.8911 | likely_pathogenic | 0.8788 | pathogenic | -1.244 | Destabilizing | 0.996 | D | 0.752 | deleterious | None | None | None | None | I |
S/Y | 0.6545 | likely_pathogenic | 0.6391 | pathogenic | -1.011 | Destabilizing | 0.984 | D | 0.741 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.