Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27769 | 83530;83531;83532 | chr2:178562827;178562826;178562825 | chr2:179427554;179427553;179427552 |
N2AB | 26128 | 78607;78608;78609 | chr2:178562827;178562826;178562825 | chr2:179427554;179427553;179427552 |
N2A | 25201 | 75826;75827;75828 | chr2:178562827;178562826;178562825 | chr2:179427554;179427553;179427552 |
N2B | 18704 | 56335;56336;56337 | chr2:178562827;178562826;178562825 | chr2:179427554;179427553;179427552 |
Novex-1 | 18829 | 56710;56711;56712 | chr2:178562827;178562826;178562825 | chr2:179427554;179427553;179427552 |
Novex-2 | 18896 | 56911;56912;56913 | chr2:178562827;178562826;178562825 | chr2:179427554;179427553;179427552 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | None | None | 0.958 | N | 0.735 | 0.28 | 0.323886383625 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
A/V | None | None | 0.979 | N | 0.778 | 0.418 | 0.491112125781 | gnomAD-4.0.0 | 5.47655E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.1976E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5204 | ambiguous | 0.52 | ambiguous | -1.044 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
A/D | 0.6648 | likely_pathogenic | 0.6826 | pathogenic | -1.758 | Destabilizing | 0.994 | D | 0.847 | deleterious | D | 0.532311957 | None | None | I |
A/E | 0.3849 | ambiguous | 0.4104 | ambiguous | -1.805 | Destabilizing | 0.991 | D | 0.796 | deleterious | None | None | None | None | I |
A/F | 0.5887 | likely_pathogenic | 0.5878 | pathogenic | -1.242 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
A/G | 0.2185 | likely_benign | 0.2178 | benign | -1.323 | Destabilizing | 0.958 | D | 0.723 | prob.delet. | D | 0.532565447 | None | None | I |
A/H | 0.6703 | likely_pathogenic | 0.6686 | pathogenic | -1.41 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | I |
A/I | 0.4236 | ambiguous | 0.4457 | ambiguous | -0.62 | Destabilizing | 0.995 | D | 0.811 | deleterious | None | None | None | None | I |
A/K | 0.6258 | likely_pathogenic | 0.6413 | pathogenic | -1.313 | Destabilizing | 0.991 | D | 0.808 | deleterious | None | None | None | None | I |
A/L | 0.3332 | likely_benign | 0.3463 | ambiguous | -0.62 | Destabilizing | 0.968 | D | 0.804 | deleterious | None | None | None | None | I |
A/M | 0.3454 | ambiguous | 0.3603 | ambiguous | -0.471 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
A/N | 0.51 | ambiguous | 0.5109 | ambiguous | -1.063 | Destabilizing | 0.995 | D | 0.851 | deleterious | None | None | None | None | I |
A/P | 0.1425 | likely_benign | 0.1511 | benign | -0.74 | Destabilizing | 0.142 | N | 0.522 | neutral | N | 0.423880704 | None | None | I |
A/Q | 0.4143 | ambiguous | 0.4221 | ambiguous | -1.302 | Destabilizing | 0.995 | D | 0.82 | deleterious | None | None | None | None | I |
A/R | 0.583 | likely_pathogenic | 0.6025 | pathogenic | -0.885 | Destabilizing | 0.995 | D | 0.811 | deleterious | None | None | None | None | I |
A/S | 0.1127 | likely_benign | 0.107 | benign | -1.347 | Destabilizing | 0.958 | D | 0.735 | prob.delet. | N | 0.521583396 | None | None | I |
A/T | 0.1692 | likely_benign | 0.1775 | benign | -1.32 | Destabilizing | 0.988 | D | 0.832 | deleterious | N | 0.50021805 | None | None | I |
A/V | 0.22 | likely_benign | 0.2368 | benign | -0.74 | Destabilizing | 0.979 | D | 0.778 | deleterious | N | 0.498078457 | None | None | I |
A/W | 0.9086 | likely_pathogenic | 0.9148 | pathogenic | -1.538 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | I |
A/Y | 0.6737 | likely_pathogenic | 0.676 | pathogenic | -1.177 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.