Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2776983530;83531;83532 chr2:178562827;178562826;178562825chr2:179427554;179427553;179427552
N2AB2612878607;78608;78609 chr2:178562827;178562826;178562825chr2:179427554;179427553;179427552
N2A2520175826;75827;75828 chr2:178562827;178562826;178562825chr2:179427554;179427553;179427552
N2B1870456335;56336;56337 chr2:178562827;178562826;178562825chr2:179427554;179427553;179427552
Novex-11882956710;56711;56712 chr2:178562827;178562826;178562825chr2:179427554;179427553;179427552
Novex-21889656911;56912;56913 chr2:178562827;178562826;178562825chr2:179427554;179427553;179427552
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: A
  • RefSeq wild type transcript codon: GCC
  • RefSeq wild type template codon: CGG
  • Domain: Fn3-90
  • Domain position: 4
  • Structural Position: 4
  • Q(SASA): 0.1705
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
A/S None None 0.958 N 0.735 0.28 0.323886383625 gnomAD-4.0.0 1.20033E-06 None None None None I None 0 0 None 0 0 None 0 0 1.31251E-06 0 0
A/V None None 0.979 N 0.778 0.418 0.491112125781 gnomAD-4.0.0 5.47655E-06 None None None None I None 0 0 None 0 0 None 0 0 7.1976E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
A/C 0.5204 ambiguous 0.52 ambiguous -1.044 Destabilizing 1.0 D 0.815 deleterious None None None None I
A/D 0.6648 likely_pathogenic 0.6826 pathogenic -1.758 Destabilizing 0.994 D 0.847 deleterious D 0.532311957 None None I
A/E 0.3849 ambiguous 0.4104 ambiguous -1.805 Destabilizing 0.991 D 0.796 deleterious None None None None I
A/F 0.5887 likely_pathogenic 0.5878 pathogenic -1.242 Destabilizing 1.0 D 0.853 deleterious None None None None I
A/G 0.2185 likely_benign 0.2178 benign -1.323 Destabilizing 0.958 D 0.723 prob.delet. D 0.532565447 None None I
A/H 0.6703 likely_pathogenic 0.6686 pathogenic -1.41 Destabilizing 1.0 D 0.833 deleterious None None None None I
A/I 0.4236 ambiguous 0.4457 ambiguous -0.62 Destabilizing 0.995 D 0.811 deleterious None None None None I
A/K 0.6258 likely_pathogenic 0.6413 pathogenic -1.313 Destabilizing 0.991 D 0.808 deleterious None None None None I
A/L 0.3332 likely_benign 0.3463 ambiguous -0.62 Destabilizing 0.968 D 0.804 deleterious None None None None I
A/M 0.3454 ambiguous 0.3603 ambiguous -0.471 Destabilizing 1.0 D 0.801 deleterious None None None None I
A/N 0.51 ambiguous 0.5109 ambiguous -1.063 Destabilizing 0.995 D 0.851 deleterious None None None None I
A/P 0.1425 likely_benign 0.1511 benign -0.74 Destabilizing 0.142 N 0.522 neutral N 0.423880704 None None I
A/Q 0.4143 ambiguous 0.4221 ambiguous -1.302 Destabilizing 0.995 D 0.82 deleterious None None None None I
A/R 0.583 likely_pathogenic 0.6025 pathogenic -0.885 Destabilizing 0.995 D 0.811 deleterious None None None None I
A/S 0.1127 likely_benign 0.107 benign -1.347 Destabilizing 0.958 D 0.735 prob.delet. N 0.521583396 None None I
A/T 0.1692 likely_benign 0.1775 benign -1.32 Destabilizing 0.988 D 0.832 deleterious N 0.50021805 None None I
A/V 0.22 likely_benign 0.2368 benign -0.74 Destabilizing 0.979 D 0.778 deleterious N 0.498078457 None None I
A/W 0.9086 likely_pathogenic 0.9148 pathogenic -1.538 Destabilizing 1.0 D 0.842 deleterious None None None None I
A/Y 0.6737 likely_pathogenic 0.676 pathogenic -1.177 Destabilizing 1.0 D 0.855 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.