Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2777 | 8554;8555;8556 | chr2:178770463;178770462;178770461 | chr2:179635190;179635189;179635188 |
N2AB | 2777 | 8554;8555;8556 | chr2:178770463;178770462;178770461 | chr2:179635190;179635189;179635188 |
N2A | 2777 | 8554;8555;8556 | chr2:178770463;178770462;178770461 | chr2:179635190;179635189;179635188 |
N2B | 2731 | 8416;8417;8418 | chr2:178770463;178770462;178770461 | chr2:179635190;179635189;179635188 |
Novex-1 | 2731 | 8416;8417;8418 | chr2:178770463;178770462;178770461 | chr2:179635190;179635189;179635188 |
Novex-2 | 2731 | 8416;8417;8418 | chr2:178770463;178770462;178770461 | chr2:179635190;179635189;179635188 |
Novex-3 | 2777 | 8554;8555;8556 | chr2:178770463;178770462;178770461 | chr2:179635190;179635189;179635188 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | D | 0.838 | 0.959 | 0.93031496195 | gnomAD-4.0.0 | 1.36815E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79859E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9661 | likely_pathogenic | 0.979 | pathogenic | -1.803 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
Y/C | 0.6303 | likely_pathogenic | 0.7325 | pathogenic | -1.675 | Destabilizing | 1.0 | D | 0.838 | deleterious | D | 0.675034475 | None | None | N |
Y/D | 0.9939 | likely_pathogenic | 0.9961 | pathogenic | -2.111 | Highly Destabilizing | 1.0 | D | 0.872 | deleterious | D | 0.675034475 | None | None | N |
Y/E | 0.9957 | likely_pathogenic | 0.9971 | pathogenic | -1.902 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
Y/F | 0.1673 | likely_benign | 0.1743 | benign | -0.653 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | D | 0.625895629 | None | None | N |
Y/G | 0.9703 | likely_pathogenic | 0.9822 | pathogenic | -2.188 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
Y/H | 0.9243 | likely_pathogenic | 0.9482 | pathogenic | -1.411 | Destabilizing | 1.0 | D | 0.798 | deleterious | D | 0.675340558 | None | None | N |
Y/I | 0.6711 | likely_pathogenic | 0.7238 | pathogenic | -0.556 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
Y/K | 0.9964 | likely_pathogenic | 0.9975 | pathogenic | -1.813 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
Y/L | 0.64 | likely_pathogenic | 0.7063 | pathogenic | -0.556 | Destabilizing | 0.999 | D | 0.784 | deleterious | None | None | None | None | N |
Y/M | 0.9236 | likely_pathogenic | 0.9394 | pathogenic | -0.742 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
Y/N | 0.9621 | likely_pathogenic | 0.9763 | pathogenic | -2.628 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | D | 0.675034475 | None | None | N |
Y/P | 0.9899 | likely_pathogenic | 0.9938 | pathogenic | -0.98 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
Y/Q | 0.9941 | likely_pathogenic | 0.9962 | pathogenic | -2.187 | Highly Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
Y/R | 0.9821 | likely_pathogenic | 0.9878 | pathogenic | -2.084 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
Y/S | 0.9482 | likely_pathogenic | 0.9688 | pathogenic | -2.991 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.675034475 | None | None | N |
Y/T | 0.9592 | likely_pathogenic | 0.9749 | pathogenic | -2.647 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
Y/V | 0.5706 | likely_pathogenic | 0.6355 | pathogenic | -0.98 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
Y/W | 0.7708 | likely_pathogenic | 0.7855 | pathogenic | -0.179 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.