Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27779 | 83560;83561;83562 | chr2:178562797;178562796;178562795 | chr2:179427524;179427523;179427522 |
N2AB | 26138 | 78637;78638;78639 | chr2:178562797;178562796;178562795 | chr2:179427524;179427523;179427522 |
N2A | 25211 | 75856;75857;75858 | chr2:178562797;178562796;178562795 | chr2:179427524;179427523;179427522 |
N2B | 18714 | 56365;56366;56367 | chr2:178562797;178562796;178562795 | chr2:179427524;179427523;179427522 |
Novex-1 | 18839 | 56740;56741;56742 | chr2:178562797;178562796;178562795 | chr2:179427524;179427523;179427522 |
Novex-2 | 18906 | 56941;56942;56943 | chr2:178562797;178562796;178562795 | chr2:179427524;179427523;179427522 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1410411613 | 0.063 | 0.864 | N | 0.478 | 0.145 | 0.201204373187 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
K/N | rs1410411613 | 0.063 | 0.864 | N | 0.478 | 0.145 | 0.201204373187 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/N | rs1410411613 | 0.063 | 0.864 | N | 0.478 | 0.145 | 0.201204373187 | gnomAD-4.0.0 | 2.56416E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78833E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4052 | ambiguous | 0.4265 | ambiguous | -0.348 | Destabilizing | 0.707 | D | 0.447 | neutral | None | None | None | None | N |
K/C | 0.5901 | likely_pathogenic | 0.5854 | pathogenic | -0.502 | Destabilizing | 0.995 | D | 0.657 | neutral | None | None | None | None | N |
K/D | 0.6739 | likely_pathogenic | 0.7097 | pathogenic | -0.191 | Destabilizing | 0.894 | D | 0.463 | neutral | None | None | None | None | N |
K/E | 0.2639 | likely_benign | 0.2975 | benign | -0.119 | Destabilizing | 0.477 | N | 0.513 | neutral | N | 0.479307125 | None | None | N |
K/F | 0.8175 | likely_pathogenic | 0.8429 | pathogenic | -0.19 | Destabilizing | 0.945 | D | 0.644 | neutral | None | None | None | None | N |
K/G | 0.3762 | ambiguous | 0.3767 | ambiguous | -0.677 | Destabilizing | 0.707 | D | 0.459 | neutral | None | None | None | None | N |
K/H | 0.3189 | likely_benign | 0.3294 | benign | -1.039 | Destabilizing | 0.985 | D | 0.491 | neutral | None | None | None | None | N |
K/I | 0.6037 | likely_pathogenic | 0.6346 | pathogenic | 0.482 | Stabilizing | 0.894 | D | 0.643 | neutral | None | None | None | None | N |
K/L | 0.4273 | ambiguous | 0.4613 | ambiguous | 0.482 | Stabilizing | 0.707 | D | 0.461 | neutral | None | None | None | None | N |
K/M | 0.2957 | likely_benign | 0.3195 | benign | 0.419 | Stabilizing | 0.993 | D | 0.488 | neutral | D | 0.522271255 | None | None | N |
K/N | 0.4815 | ambiguous | 0.5178 | ambiguous | -0.261 | Destabilizing | 0.864 | D | 0.478 | neutral | N | 0.44694399 | None | None | N |
K/P | 0.9249 | likely_pathogenic | 0.9328 | pathogenic | 0.236 | Stabilizing | 0.945 | D | 0.514 | neutral | None | None | None | None | N |
K/Q | 0.1332 | likely_benign | 0.1395 | benign | -0.451 | Destabilizing | 0.864 | D | 0.525 | neutral | N | 0.475093384 | None | None | N |
K/R | 0.0747 | likely_benign | 0.0769 | benign | -0.425 | Destabilizing | 0.013 | N | 0.279 | neutral | N | 0.422299049 | None | None | N |
K/S | 0.4134 | ambiguous | 0.4448 | ambiguous | -0.887 | Destabilizing | 0.547 | D | 0.488 | neutral | None | None | None | None | N |
K/T | 0.164 | likely_benign | 0.1735 | benign | -0.628 | Destabilizing | 0.053 | N | 0.303 | neutral | N | 0.351318811 | None | None | N |
K/V | 0.4903 | ambiguous | 0.5237 | ambiguous | 0.236 | Stabilizing | 0.894 | D | 0.453 | neutral | None | None | None | None | N |
K/W | 0.7911 | likely_pathogenic | 0.8021 | pathogenic | -0.06 | Destabilizing | 0.995 | D | 0.67 | neutral | None | None | None | None | N |
K/Y | 0.7114 | likely_pathogenic | 0.7358 | pathogenic | 0.258 | Stabilizing | 0.945 | D | 0.608 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.