Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27785 | 83578;83579;83580 | chr2:178562779;178562778;178562777 | chr2:179427506;179427505;179427504 |
N2AB | 26144 | 78655;78656;78657 | chr2:178562779;178562778;178562777 | chr2:179427506;179427505;179427504 |
N2A | 25217 | 75874;75875;75876 | chr2:178562779;178562778;178562777 | chr2:179427506;179427505;179427504 |
N2B | 18720 | 56383;56384;56385 | chr2:178562779;178562778;178562777 | chr2:179427506;179427505;179427504 |
Novex-1 | 18845 | 56758;56759;56760 | chr2:178562779;178562778;178562777 | chr2:179427506;179427505;179427504 |
Novex-2 | 18912 | 56959;56960;56961 | chr2:178562779;178562778;178562777 | chr2:179427506;179427505;179427504 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.994 | D | 0.689 | 0.374 | 0.641816012551 | gnomAD-4.0.0 | 1.59239E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43332E-05 | 0 |
L/S | None | None | 1.0 | D | 0.879 | 0.628 | 0.808818361352 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8485 | likely_pathogenic | 0.8659 | pathogenic | -2.527 | Highly Destabilizing | 0.993 | D | 0.711 | prob.delet. | None | None | None | None | N |
L/C | 0.8359 | likely_pathogenic | 0.8597 | pathogenic | -1.516 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
L/D | 0.9995 | likely_pathogenic | 0.9996 | pathogenic | -2.976 | Highly Destabilizing | 1.0 | D | 0.925 | deleterious | None | None | None | None | N |
L/E | 0.9968 | likely_pathogenic | 0.9973 | pathogenic | -2.631 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/F | 0.4699 | ambiguous | 0.5468 | ambiguous | -1.527 | Destabilizing | 0.994 | D | 0.689 | prob.neutral | D | 0.539814511 | None | None | N |
L/G | 0.9879 | likely_pathogenic | 0.9895 | pathogenic | -3.151 | Highly Destabilizing | 0.999 | D | 0.911 | deleterious | None | None | None | None | N |
L/H | 0.9901 | likely_pathogenic | 0.9923 | pathogenic | -3.049 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
L/I | 0.0723 | likely_benign | 0.079 | benign | -0.636 | Destabilizing | 0.034 | N | 0.333 | neutral | None | None | None | None | N |
L/K | 0.9942 | likely_pathogenic | 0.9957 | pathogenic | -1.743 | Destabilizing | 0.999 | D | 0.891 | deleterious | None | None | None | None | N |
L/M | 0.24 | likely_benign | 0.2601 | benign | -0.836 | Destabilizing | 0.979 | D | 0.667 | neutral | N | 0.515304701 | None | None | N |
L/N | 0.9966 | likely_pathogenic | 0.9971 | pathogenic | -2.529 | Highly Destabilizing | 1.0 | D | 0.927 | deleterious | None | None | None | None | N |
L/P | 0.9935 | likely_pathogenic | 0.9951 | pathogenic | -1.26 | Destabilizing | 1.0 | D | 0.924 | deleterious | None | None | None | None | N |
L/Q | 0.9873 | likely_pathogenic | 0.9899 | pathogenic | -2.057 | Highly Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
L/R | 0.9879 | likely_pathogenic | 0.9912 | pathogenic | -2.098 | Highly Destabilizing | 1.0 | D | 0.912 | deleterious | None | None | None | None | N |
L/S | 0.9863 | likely_pathogenic | 0.9883 | pathogenic | -3.019 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.552438264 | None | None | N |
L/T | 0.9354 | likely_pathogenic | 0.937 | pathogenic | -2.493 | Highly Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
L/V | 0.0927 | likely_benign | 0.0976 | benign | -1.26 | Destabilizing | 0.132 | N | 0.35 | neutral | D | 0.524122269 | None | None | N |
L/W | 0.9626 | likely_pathogenic | 0.9757 | pathogenic | -1.827 | Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.563794569 | None | None | N |
L/Y | 0.9509 | likely_pathogenic | 0.9655 | pathogenic | -1.669 | Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.