Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27789 | 83590;83591;83592 | chr2:178562767;178562766;178562765 | chr2:179427494;179427493;179427492 |
N2AB | 26148 | 78667;78668;78669 | chr2:178562767;178562766;178562765 | chr2:179427494;179427493;179427492 |
N2A | 25221 | 75886;75887;75888 | chr2:178562767;178562766;178562765 | chr2:179427494;179427493;179427492 |
N2B | 18724 | 56395;56396;56397 | chr2:178562767;178562766;178562765 | chr2:179427494;179427493;179427492 |
Novex-1 | 18849 | 56770;56771;56772 | chr2:178562767;178562766;178562765 | chr2:179427494;179427493;179427492 |
Novex-2 | 18916 | 56971;56972;56973 | chr2:178562767;178562766;178562765 | chr2:179427494;179427493;179427492 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs1704156538 | None | 0.008 | N | 0.363 | 0.204 | 0.231873229951 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/A | rs1704156538 | None | 0.008 | N | 0.363 | 0.204 | 0.231873229951 | gnomAD-4.0.0 | 6.57436E-06 | None | None | None | None | I | None | 2.41359E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/T | rs1704156538 | None | 0.805 | N | 0.628 | 0.354 | 0.407767136052 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0796 | likely_benign | 0.0805 | benign | -1.833 | Destabilizing | 0.008 | N | 0.363 | neutral | N | 0.484833162 | None | None | I |
P/C | 0.5995 | likely_pathogenic | 0.5843 | pathogenic | -1.242 | Destabilizing | 0.997 | D | 0.747 | deleterious | None | None | None | None | I |
P/D | 0.7385 | likely_pathogenic | 0.7787 | pathogenic | -2.232 | Highly Destabilizing | 0.604 | D | 0.657 | neutral | None | None | None | None | I |
P/E | 0.4659 | ambiguous | 0.5185 | ambiguous | -2.098 | Highly Destabilizing | 0.828 | D | 0.656 | neutral | None | None | None | None | I |
P/F | 0.5867 | likely_pathogenic | 0.5987 | pathogenic | -1.217 | Destabilizing | 0.999 | D | 0.758 | deleterious | None | None | None | None | I |
P/G | 0.453 | ambiguous | 0.4582 | ambiguous | -2.264 | Highly Destabilizing | 0.816 | D | 0.575 | neutral | None | None | None | None | I |
P/H | 0.3603 | ambiguous | 0.3786 | ambiguous | -1.81 | Destabilizing | 0.998 | D | 0.725 | prob.delet. | None | None | None | None | I |
P/I | 0.2697 | likely_benign | 0.2553 | benign | -0.678 | Destabilizing | 0.994 | D | 0.772 | deleterious | None | None | None | None | I |
P/K | 0.5083 | ambiguous | 0.5566 | ambiguous | -1.711 | Destabilizing | 0.994 | D | 0.651 | neutral | None | None | None | None | I |
P/L | 0.1121 | likely_benign | 0.1135 | benign | -0.678 | Destabilizing | 0.991 | D | 0.713 | prob.delet. | N | 0.49131728 | None | None | I |
P/M | 0.2109 | likely_benign | 0.2121 | benign | -0.548 | Destabilizing | 0.999 | D | 0.722 | prob.delet. | None | None | None | None | I |
P/N | 0.4319 | ambiguous | 0.4369 | ambiguous | -1.809 | Destabilizing | 0.038 | N | 0.432 | neutral | None | None | None | None | I |
P/Q | 0.2215 | likely_benign | 0.242 | benign | -1.804 | Destabilizing | 0.977 | D | 0.717 | prob.delet. | N | 0.492722859 | None | None | I |
P/R | 0.4565 | ambiguous | 0.498 | ambiguous | -1.309 | Destabilizing | 0.991 | D | 0.741 | deleterious | N | 0.491063791 | None | None | I |
P/S | 0.1744 | likely_benign | 0.1761 | benign | -2.333 | Highly Destabilizing | 0.822 | D | 0.563 | neutral | N | 0.494101984 | None | None | I |
P/T | 0.1408 | likely_benign | 0.1348 | benign | -2.071 | Highly Destabilizing | 0.805 | D | 0.628 | neutral | N | 0.496001315 | None | None | I |
P/V | 0.1842 | likely_benign | 0.1815 | benign | -1.033 | Destabilizing | 0.931 | D | 0.663 | neutral | None | None | None | None | I |
P/W | 0.8445 | likely_pathogenic | 0.862 | pathogenic | -1.595 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
P/Y | 0.585 | likely_pathogenic | 0.5985 | pathogenic | -1.233 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.