Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27798 | 83617;83618;83619 | chr2:178562740;178562739;178562738 | chr2:179427467;179427466;179427465 |
N2AB | 26157 | 78694;78695;78696 | chr2:178562740;178562739;178562738 | chr2:179427467;179427466;179427465 |
N2A | 25230 | 75913;75914;75915 | chr2:178562740;178562739;178562738 | chr2:179427467;179427466;179427465 |
N2B | 18733 | 56422;56423;56424 | chr2:178562740;178562739;178562738 | chr2:179427467;179427466;179427465 |
Novex-1 | 18858 | 56797;56798;56799 | chr2:178562740;178562739;178562738 | chr2:179427467;179427466;179427465 |
Novex-2 | 18925 | 56998;56999;57000 | chr2:178562740;178562739;178562738 | chr2:179427467;179427466;179427465 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | None | None | 0.999 | D | 0.815 | 0.634 | 0.886518283301 | gnomAD-4.0.0 | 1.60035E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87358E-06 | 0 | 0 |
I/T | None | None | 0.925 | N | 0.75 | 0.573 | 0.767795433346 | gnomAD-4.0.0 | 1.60035E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87358E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9782 | likely_pathogenic | 0.9721 | pathogenic | -2.318 | Highly Destabilizing | 0.965 | D | 0.649 | neutral | None | None | None | None | I |
I/C | 0.9811 | likely_pathogenic | 0.9762 | pathogenic | -1.436 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | I |
I/D | 0.9984 | likely_pathogenic | 0.9984 | pathogenic | -2.22 | Highly Destabilizing | 0.999 | D | 0.814 | deleterious | None | None | None | None | I |
I/E | 0.9957 | likely_pathogenic | 0.9951 | pathogenic | -2.153 | Highly Destabilizing | 0.997 | D | 0.807 | deleterious | None | None | None | None | I |
I/F | 0.9471 | likely_pathogenic | 0.9284 | pathogenic | -1.686 | Destabilizing | 0.992 | D | 0.749 | deleterious | D | 0.527334753 | None | None | I |
I/G | 0.9962 | likely_pathogenic | 0.9949 | pathogenic | -2.729 | Highly Destabilizing | 0.997 | D | 0.808 | deleterious | None | None | None | None | I |
I/H | 0.9971 | likely_pathogenic | 0.9966 | pathogenic | -2.047 | Highly Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | I |
I/K | 0.9924 | likely_pathogenic | 0.9905 | pathogenic | -1.639 | Destabilizing | 0.92 | D | 0.808 | deleterious | None | None | None | None | I |
I/L | 0.4582 | ambiguous | 0.4273 | ambiguous | -1.197 | Destabilizing | 0.099 | N | 0.419 | neutral | N | 0.491935937 | None | None | I |
I/M | 0.5675 | likely_pathogenic | 0.518 | ambiguous | -0.83 | Destabilizing | 0.972 | D | 0.721 | prob.delet. | D | 0.541225954 | None | None | I |
I/N | 0.9483 | likely_pathogenic | 0.9473 | pathogenic | -1.558 | Destabilizing | 0.999 | D | 0.815 | deleterious | D | 0.535491962 | None | None | I |
I/P | 0.9712 | likely_pathogenic | 0.9624 | pathogenic | -1.544 | Destabilizing | 0.999 | D | 0.818 | deleterious | None | None | None | None | I |
I/Q | 0.9945 | likely_pathogenic | 0.9928 | pathogenic | -1.684 | Destabilizing | 0.998 | D | 0.808 | deleterious | None | None | None | None | I |
I/R | 0.992 | likely_pathogenic | 0.9902 | pathogenic | -1.063 | Destabilizing | 0.998 | D | 0.814 | deleterious | None | None | None | None | I |
I/S | 0.9818 | likely_pathogenic | 0.9777 | pathogenic | -2.202 | Highly Destabilizing | 0.997 | D | 0.787 | deleterious | D | 0.552835749 | None | None | I |
I/T | 0.9543 | likely_pathogenic | 0.9407 | pathogenic | -2.011 | Highly Destabilizing | 0.925 | D | 0.75 | deleterious | N | 0.516627239 | None | None | I |
I/V | 0.1161 | likely_benign | 0.1112 | benign | -1.544 | Destabilizing | 0.002 | N | 0.228 | neutral | N | 0.461380299 | None | None | I |
I/W | 0.9988 | likely_pathogenic | 0.9986 | pathogenic | -1.888 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
I/Y | 0.9915 | likely_pathogenic | 0.9894 | pathogenic | -1.669 | Destabilizing | 0.982 | D | 0.775 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.