Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27804 | 83635;83636;83637 | chr2:178562722;178562721;178562720 | chr2:179427449;179427448;179427447 |
N2AB | 26163 | 78712;78713;78714 | chr2:178562722;178562721;178562720 | chr2:179427449;179427448;179427447 |
N2A | 25236 | 75931;75932;75933 | chr2:178562722;178562721;178562720 | chr2:179427449;179427448;179427447 |
N2B | 18739 | 56440;56441;56442 | chr2:178562722;178562721;178562720 | chr2:179427449;179427448;179427447 |
Novex-1 | 18864 | 56815;56816;56817 | chr2:178562722;178562721;178562720 | chr2:179427449;179427448;179427447 |
Novex-2 | 18931 | 57016;57017;57018 | chr2:178562722;178562721;178562720 | chr2:179427449;179427448;179427447 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs759095633 | -1.614 | 1.0 | N | 0.685 | 0.457 | 0.444706120422 | gnomAD-2.1.1 | 2.51E-05 | None | None | None | None | N | None | 1.31148E-04 | 0 | None | 0 | 5.75E-05 | None | 0 | None | 0 | 1.82E-05 | 1.75254E-04 |
E/K | rs759095633 | -1.614 | 1.0 | N | 0.685 | 0.457 | 0.444706120422 | gnomAD-4.0.0 | 1.24416E-05 | None | None | None | None | N | None | 1.23069E-04 | 0 | None | 0 | 2.53254E-05 | None | 1.88708E-05 | 0 | 1.08546E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.9174 | likely_pathogenic | 0.8914 | pathogenic | -1.589 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | D | 0.525810135 | None | None | N |
E/C | 0.9927 | likely_pathogenic | 0.9924 | pathogenic | -0.67 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
E/D | 0.8691 | likely_pathogenic | 0.7985 | pathogenic | -1.697 | Destabilizing | 0.998 | D | 0.662 | neutral | N | 0.471915444 | None | None | N |
E/F | 0.9976 | likely_pathogenic | 0.9977 | pathogenic | -1.267 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
E/G | 0.9417 | likely_pathogenic | 0.9298 | pathogenic | -1.986 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | D | 0.538940867 | None | None | N |
E/H | 0.9889 | likely_pathogenic | 0.9877 | pathogenic | -1.06 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
E/I | 0.9893 | likely_pathogenic | 0.9881 | pathogenic | -0.444 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
E/K | 0.9689 | likely_pathogenic | 0.9647 | pathogenic | -1.332 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | N | 0.498867562 | None | None | N |
E/L | 0.9846 | likely_pathogenic | 0.9833 | pathogenic | -0.444 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/M | 0.9754 | likely_pathogenic | 0.9722 | pathogenic | 0.293 | Stabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
E/N | 0.9787 | likely_pathogenic | 0.9652 | pathogenic | -1.593 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
E/P | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -0.812 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
E/Q | 0.5457 | ambiguous | 0.5212 | ambiguous | -1.311 | Destabilizing | 1.0 | D | 0.764 | deleterious | N | 0.468077102 | None | None | N |
E/R | 0.9768 | likely_pathogenic | 0.9751 | pathogenic | -1.161 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
E/S | 0.9202 | likely_pathogenic | 0.8895 | pathogenic | -2.247 | Highly Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
E/T | 0.9767 | likely_pathogenic | 0.9644 | pathogenic | -1.861 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/V | 0.9692 | likely_pathogenic | 0.964 | pathogenic | -0.812 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | N | 0.497110043 | None | None | N |
E/W | 0.9991 | likely_pathogenic | 0.9993 | pathogenic | -1.299 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
E/Y | 0.9961 | likely_pathogenic | 0.9957 | pathogenic | -1.038 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.