Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27807 | 83644;83645;83646 | chr2:178562713;178562712;178562711 | chr2:179427440;179427439;179427438 |
N2AB | 26166 | 78721;78722;78723 | chr2:178562713;178562712;178562711 | chr2:179427440;179427439;179427438 |
N2A | 25239 | 75940;75941;75942 | chr2:178562713;178562712;178562711 | chr2:179427440;179427439;179427438 |
N2B | 18742 | 56449;56450;56451 | chr2:178562713;178562712;178562711 | chr2:179427440;179427439;179427438 |
Novex-1 | 18867 | 56824;56825;56826 | chr2:178562713;178562712;178562711 | chr2:179427440;179427439;179427438 |
Novex-2 | 18934 | 57025;57026;57027 | chr2:178562713;178562712;178562711 | chr2:179427440;179427439;179427438 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.986 | N | 0.628 | 0.563 | 0.485634191555 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
E/Q | rs1439000157 | -1.067 | 0.99 | N | 0.543 | 0.251 | 0.411932830014 | gnomAD-2.1.1 | 4.23E-06 | None | None | None | None | N | None | 0 | 3.13E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs1439000157 | -1.067 | 0.99 | N | 0.543 | 0.251 | 0.411932830014 | gnomAD-4.0.0 | 1.63494E-06 | None | None | None | None | N | None | 0 | 2.4505E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.7921 | likely_pathogenic | 0.8169 | pathogenic | -1.007 | Destabilizing | 0.914 | D | 0.511 | neutral | N | 0.487550936 | None | None | N |
E/C | 0.9914 | likely_pathogenic | 0.9924 | pathogenic | -0.535 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
E/D | 0.4593 | ambiguous | 0.4931 | ambiguous | -1.183 | Destabilizing | 0.008 | N | 0.32 | neutral | N | 0.49674088 | None | None | N |
E/F | 0.9931 | likely_pathogenic | 0.9945 | pathogenic | -0.459 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/G | 0.8371 | likely_pathogenic | 0.856 | pathogenic | -1.375 | Destabilizing | 0.986 | D | 0.628 | neutral | N | 0.490704488 | None | None | N |
E/H | 0.9748 | likely_pathogenic | 0.9813 | pathogenic | -0.738 | Destabilizing | 0.999 | D | 0.61 | neutral | None | None | None | None | N |
E/I | 0.9609 | likely_pathogenic | 0.969 | pathogenic | 0.002 | Stabilizing | 0.994 | D | 0.817 | deleterious | None | None | None | None | N |
E/K | 0.8957 | likely_pathogenic | 0.921 | pathogenic | -0.766 | Destabilizing | 0.109 | N | 0.333 | neutral | N | 0.47145769 | None | None | N |
E/L | 0.9294 | likely_pathogenic | 0.9459 | pathogenic | 0.002 | Stabilizing | 0.988 | D | 0.751 | deleterious | None | None | None | None | N |
E/M | 0.9497 | likely_pathogenic | 0.9586 | pathogenic | 0.526 | Stabilizing | 0.997 | D | 0.736 | prob.delet. | None | None | None | None | N |
E/N | 0.9032 | likely_pathogenic | 0.9188 | pathogenic | -1.225 | Destabilizing | 0.975 | D | 0.578 | neutral | None | None | None | None | N |
E/P | 0.9707 | likely_pathogenic | 0.9703 | pathogenic | -0.314 | Destabilizing | 0.963 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/Q | 0.7409 | likely_pathogenic | 0.7768 | pathogenic | -1.094 | Destabilizing | 0.99 | D | 0.543 | neutral | N | 0.484624421 | None | None | N |
E/R | 0.9487 | likely_pathogenic | 0.9596 | pathogenic | -0.465 | Destabilizing | 0.989 | D | 0.568 | neutral | None | None | None | None | N |
E/S | 0.8929 | likely_pathogenic | 0.9085 | pathogenic | -1.555 | Destabilizing | 0.966 | D | 0.443 | neutral | None | None | None | None | N |
E/T | 0.9445 | likely_pathogenic | 0.9516 | pathogenic | -1.25 | Destabilizing | 0.993 | D | 0.633 | neutral | None | None | None | None | N |
E/V | 0.9022 | likely_pathogenic | 0.9172 | pathogenic | -0.314 | Destabilizing | 0.979 | D | 0.719 | prob.delet. | N | 0.505517061 | None | None | N |
E/W | 0.9977 | likely_pathogenic | 0.9983 | pathogenic | -0.194 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
E/Y | 0.9859 | likely_pathogenic | 0.9895 | pathogenic | -0.212 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.