Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27809 | 83650;83651;83652 | chr2:178562707;178562706;178562705 | chr2:179427434;179427433;179427432 |
N2AB | 26168 | 78727;78728;78729 | chr2:178562707;178562706;178562705 | chr2:179427434;179427433;179427432 |
N2A | 25241 | 75946;75947;75948 | chr2:178562707;178562706;178562705 | chr2:179427434;179427433;179427432 |
N2B | 18744 | 56455;56456;56457 | chr2:178562707;178562706;178562705 | chr2:179427434;179427433;179427432 |
Novex-1 | 18869 | 56830;56831;56832 | chr2:178562707;178562706;178562705 | chr2:179427434;179427433;179427432 |
Novex-2 | 18936 | 57031;57032;57033 | chr2:178562707;178562706;178562705 | chr2:179427434;179427433;179427432 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.017 | N | 0.303 | 0.161 | 0.17948927462 | gnomAD-4.0.0 | 1.63701E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.91863E-06 | 0 | 0 |
T/I | rs922881378 | -0.074 | 0.813 | N | 0.299 | 0.274 | 0.335910606209 | gnomAD-2.1.1 | 8.51E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.84E-05 | 0 |
T/I | rs922881378 | -0.074 | 0.813 | N | 0.299 | 0.274 | 0.335910606209 | gnomAD-4.0.0 | 1.63708E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.51067E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1209 | likely_benign | 0.1396 | benign | -0.153 | Destabilizing | 0.017 | N | 0.303 | neutral | N | 0.477210969 | None | None | N |
T/C | 0.7313 | likely_pathogenic | 0.7878 | pathogenic | -0.4 | Destabilizing | 0.98 | D | 0.353 | neutral | None | None | None | None | N |
T/D | 0.7414 | likely_pathogenic | 0.8036 | pathogenic | -0.007 | Destabilizing | 0.08 | N | 0.223 | neutral | None | None | None | None | N |
T/E | 0.6674 | likely_pathogenic | 0.7464 | pathogenic | -0.1 | Destabilizing | 0.367 | N | 0.24 | neutral | None | None | None | None | N |
T/F | 0.5816 | likely_pathogenic | 0.6688 | pathogenic | -0.814 | Destabilizing | 0.979 | D | 0.405 | neutral | None | None | None | None | N |
T/G | 0.308 | likely_benign | 0.3285 | benign | -0.206 | Destabilizing | 0.422 | N | 0.315 | neutral | None | None | None | None | N |
T/H | 0.5385 | ambiguous | 0.6082 | pathogenic | -0.342 | Destabilizing | 0.852 | D | 0.401 | neutral | None | None | None | None | N |
T/I | 0.502 | ambiguous | 0.5816 | pathogenic | -0.134 | Destabilizing | 0.813 | D | 0.299 | neutral | N | 0.471395238 | None | None | N |
T/K | 0.5318 | ambiguous | 0.6164 | pathogenic | -0.294 | Destabilizing | 0.003 | N | 0.255 | neutral | N | 0.459721287 | None | None | N |
T/L | 0.2088 | likely_benign | 0.258 | benign | -0.134 | Destabilizing | 0.622 | D | 0.242 | neutral | None | None | None | None | N |
T/M | 0.1652 | likely_benign | 0.2016 | benign | -0.166 | Destabilizing | 0.985 | D | 0.299 | neutral | None | None | None | None | N |
T/N | 0.2587 | likely_benign | 0.2949 | benign | -0.125 | Destabilizing | 0.001 | N | 0.245 | neutral | None | None | None | None | N |
T/P | 0.3869 | ambiguous | 0.3844 | ambiguous | -0.116 | Destabilizing | 0.74 | D | 0.273 | neutral | N | 0.51867359 | None | None | N |
T/Q | 0.4319 | ambiguous | 0.5054 | ambiguous | -0.331 | Destabilizing | 0.571 | D | 0.269 | neutral | None | None | None | None | N |
T/R | 0.4896 | ambiguous | 0.5977 | pathogenic | 0.004 | Stabilizing | 0.45 | N | 0.245 | neutral | N | 0.505877651 | None | None | N |
T/S | 0.1388 | likely_benign | 0.1611 | benign | -0.288 | Destabilizing | 0.009 | N | 0.354 | neutral | N | 0.434516198 | None | None | N |
T/V | 0.3184 | likely_benign | 0.3674 | ambiguous | -0.116 | Destabilizing | 0.541 | D | 0.224 | neutral | None | None | None | None | N |
T/W | 0.8843 | likely_pathogenic | 0.9082 | pathogenic | -0.904 | Destabilizing | 0.994 | D | 0.517 | neutral | None | None | None | None | N |
T/Y | 0.6755 | likely_pathogenic | 0.7452 | pathogenic | -0.58 | Destabilizing | 0.979 | D | 0.409 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.