Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27823 | 83692;83693;83694 | chr2:178562665;178562664;178562663 | chr2:179427392;179427391;179427390 |
N2AB | 26182 | 78769;78770;78771 | chr2:178562665;178562664;178562663 | chr2:179427392;179427391;179427390 |
N2A | 25255 | 75988;75989;75990 | chr2:178562665;178562664;178562663 | chr2:179427392;179427391;179427390 |
N2B | 18758 | 56497;56498;56499 | chr2:178562665;178562664;178562663 | chr2:179427392;179427391;179427390 |
Novex-1 | 18883 | 56872;56873;56874 | chr2:178562665;178562664;178562663 | chr2:179427392;179427391;179427390 |
Novex-2 | 18950 | 57073;57074;57075 | chr2:178562665;178562664;178562663 | chr2:179427392;179427391;179427390 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs940216066 | -0.809 | 0.001 | N | 0.297 | 0.325 | 0.283761946502 | gnomAD-2.1.1 | 4.28E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.25E-06 | 0 |
T/A | rs940216066 | -0.809 | 0.001 | N | 0.297 | 0.325 | 0.283761946502 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/A | rs940216066 | -0.809 | 0.001 | N | 0.297 | 0.325 | 0.283761946502 | gnomAD-4.0.0 | 3.9291E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.28905E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0823 | likely_benign | 0.0795 | benign | -0.886 | Destabilizing | 0.001 | N | 0.297 | neutral | N | 0.500615535 | None | None | N |
T/C | 0.1568 | likely_benign | 0.169 | benign | -0.384 | Destabilizing | 0.92 | D | 0.497 | neutral | None | None | None | None | N |
T/D | 0.3604 | ambiguous | 0.3922 | ambiguous | -0.231 | Destabilizing | 0.008 | N | 0.408 | neutral | None | None | None | None | N |
T/E | 0.4522 | ambiguous | 0.4617 | ambiguous | -0.105 | Destabilizing | 0.027 | N | 0.411 | neutral | None | None | None | None | N |
T/F | 0.3081 | likely_benign | 0.2946 | benign | -0.821 | Destabilizing | 0.916 | D | 0.543 | neutral | None | None | None | None | N |
T/G | 0.1412 | likely_benign | 0.1475 | benign | -1.239 | Destabilizing | 0.065 | N | 0.429 | neutral | None | None | None | None | N |
T/H | 0.1773 | likely_benign | 0.1899 | benign | -1.311 | Destabilizing | 0.398 | N | 0.541 | neutral | None | None | None | None | N |
T/I | 0.2129 | likely_benign | 0.2084 | benign | 0.005 | Stabilizing | 0.224 | N | 0.557 | neutral | N | 0.504476649 | None | None | N |
T/K | 0.3396 | likely_benign | 0.3338 | benign | -0.234 | Destabilizing | 0.037 | N | 0.399 | neutral | None | None | None | None | N |
T/L | 0.08 | likely_benign | 0.0777 | benign | 0.005 | Stabilizing | 0.072 | N | 0.418 | neutral | None | None | None | None | N |
T/M | 0.0888 | likely_benign | 0.0828 | benign | 0.013 | Stabilizing | 0.803 | D | 0.505 | neutral | None | None | None | None | N |
T/N | 0.0407 | likely_benign | 0.043 | benign | -0.63 | Destabilizing | None | N | 0.203 | neutral | N | 0.490025551 | None | None | N |
T/P | 0.0976 | likely_benign | 0.0947 | benign | -0.259 | Destabilizing | 0.058 | N | 0.508 | neutral | N | 0.479864708 | None | None | N |
T/Q | 0.2335 | likely_benign | 0.2336 | benign | -0.51 | Destabilizing | 0.081 | N | 0.485 | neutral | None | None | None | None | N |
T/R | 0.3192 | likely_benign | 0.3046 | benign | -0.292 | Destabilizing | 0.002 | N | 0.288 | neutral | None | None | None | None | N |
T/S | 0.0794 | likely_benign | 0.0822 | benign | -0.965 | Destabilizing | None | N | 0.213 | neutral | N | 0.496563384 | None | None | N |
T/V | 0.1609 | likely_benign | 0.1522 | benign | -0.259 | Destabilizing | 0.119 | N | 0.324 | neutral | None | None | None | None | N |
T/W | 0.6588 | likely_pathogenic | 0.6376 | pathogenic | -0.88 | Destabilizing | 0.976 | D | 0.569 | neutral | None | None | None | None | N |
T/Y | 0.1884 | likely_benign | 0.1944 | benign | -0.524 | Destabilizing | 0.916 | D | 0.547 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.