Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27825 | 83698;83699;83700 | chr2:178562659;178562658;178562657 | chr2:179427386;179427385;179427384 |
N2AB | 26184 | 78775;78776;78777 | chr2:178562659;178562658;178562657 | chr2:179427386;179427385;179427384 |
N2A | 25257 | 75994;75995;75996 | chr2:178562659;178562658;178562657 | chr2:179427386;179427385;179427384 |
N2B | 18760 | 56503;56504;56505 | chr2:178562659;178562658;178562657 | chr2:179427386;179427385;179427384 |
Novex-1 | 18885 | 56878;56879;56880 | chr2:178562659;178562658;178562657 | chr2:179427386;179427385;179427384 |
Novex-2 | 18952 | 57079;57080;57081 | chr2:178562659;178562658;178562657 | chr2:179427386;179427385;179427384 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | None | None | 0.815 | N | 0.565 | 0.361 | 0.490976584422 | gnomAD-4.0.0 | 4.89272E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.89847E-05 | 0 | 0 | 0 | 6.17475E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.6506 | likely_pathogenic | 0.6868 | pathogenic | -2.197 | Highly Destabilizing | 0.742 | D | 0.52 | neutral | None | None | None | None | N |
F/C | 0.2534 | likely_benign | 0.2703 | benign | -1.472 | Destabilizing | 0.994 | D | 0.623 | neutral | N | 0.476461608 | None | None | N |
F/D | 0.9547 | likely_pathogenic | 0.9651 | pathogenic | -1.946 | Destabilizing | 0.984 | D | 0.643 | neutral | None | None | None | None | N |
F/E | 0.9489 | likely_pathogenic | 0.9595 | pathogenic | -1.761 | Destabilizing | 0.984 | D | 0.635 | neutral | None | None | None | None | N |
F/G | 0.8557 | likely_pathogenic | 0.8776 | pathogenic | -2.613 | Highly Destabilizing | 0.854 | D | 0.628 | neutral | None | None | None | None | N |
F/H | 0.601 | likely_pathogenic | 0.6126 | pathogenic | -1.002 | Destabilizing | 0.91 | D | 0.547 | neutral | None | None | None | None | N |
F/I | 0.3001 | likely_benign | 0.3461 | ambiguous | -0.884 | Destabilizing | 0.003 | N | 0.182 | neutral | N | 0.457182414 | None | None | N |
F/K | 0.9403 | likely_pathogenic | 0.9522 | pathogenic | -1.761 | Destabilizing | 0.953 | D | 0.635 | neutral | None | None | None | None | N |
F/L | 0.7646 | likely_pathogenic | 0.812 | pathogenic | -0.884 | Destabilizing | 0.063 | N | 0.337 | neutral | N | 0.483000791 | None | None | N |
F/M | 0.4921 | ambiguous | 0.5399 | ambiguous | -0.669 | Destabilizing | 0.91 | D | 0.459 | neutral | None | None | None | None | N |
F/N | 0.8483 | likely_pathogenic | 0.8592 | pathogenic | -2.193 | Highly Destabilizing | 0.984 | D | 0.649 | neutral | None | None | None | None | N |
F/P | 0.9964 | likely_pathogenic | 0.9977 | pathogenic | -1.325 | Destabilizing | 0.984 | D | 0.675 | prob.neutral | None | None | None | None | N |
F/Q | 0.8634 | likely_pathogenic | 0.8842 | pathogenic | -2.091 | Highly Destabilizing | 0.984 | D | 0.676 | prob.neutral | None | None | None | None | N |
F/R | 0.8795 | likely_pathogenic | 0.9032 | pathogenic | -1.342 | Destabilizing | 0.953 | D | 0.658 | neutral | None | None | None | None | N |
F/S | 0.5998 | likely_pathogenic | 0.6336 | pathogenic | -2.893 | Highly Destabilizing | 0.815 | D | 0.565 | neutral | N | 0.471257107 | None | None | N |
F/T | 0.6912 | likely_pathogenic | 0.7171 | pathogenic | -2.595 | Highly Destabilizing | 0.742 | D | 0.549 | neutral | None | None | None | None | N |
F/V | 0.2682 | likely_benign | 0.304 | benign | -1.325 | Destabilizing | 0.134 | N | 0.471 | neutral | N | 0.474917239 | None | None | N |
F/W | 0.375 | ambiguous | 0.421 | ambiguous | 0.003 | Stabilizing | 0.984 | D | 0.473 | neutral | None | None | None | None | N |
F/Y | 0.1295 | likely_benign | 0.1287 | benign | -0.32 | Destabilizing | 0.012 | N | 0.164 | neutral | N | 0.396245811 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.