Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27827 | 83704;83705;83706 | chr2:178562653;178562652;178562651 | chr2:179427380;179427379;179427378 |
N2AB | 26186 | 78781;78782;78783 | chr2:178562653;178562652;178562651 | chr2:179427380;179427379;179427378 |
N2A | 25259 | 76000;76001;76002 | chr2:178562653;178562652;178562651 | chr2:179427380;179427379;179427378 |
N2B | 18762 | 56509;56510;56511 | chr2:178562653;178562652;178562651 | chr2:179427380;179427379;179427378 |
Novex-1 | 18887 | 56884;56885;56886 | chr2:178562653;178562652;178562651 | chr2:179427380;179427379;179427378 |
Novex-2 | 18954 | 57085;57086;57087 | chr2:178562653;178562652;178562651 | chr2:179427380;179427379;179427378 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.549 | N | 0.765 | 0.435 | 0.649176532554 | gnomAD-4.0.0 | 1.62714E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.89631E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3026 | likely_benign | 0.2964 | benign | -2.316 | Highly Destabilizing | 0.002 | N | 0.513 | neutral | None | None | None | None | N |
I/C | 0.7443 | likely_pathogenic | 0.7408 | pathogenic | -1.707 | Destabilizing | 0.977 | D | 0.807 | deleterious | None | None | None | None | N |
I/D | 0.9738 | likely_pathogenic | 0.9775 | pathogenic | -2.91 | Highly Destabilizing | 0.92 | D | 0.829 | deleterious | None | None | None | None | N |
I/E | 0.938 | likely_pathogenic | 0.9423 | pathogenic | -2.603 | Highly Destabilizing | 0.85 | D | 0.803 | deleterious | None | None | None | None | N |
I/F | 0.3309 | likely_benign | 0.3311 | benign | -1.437 | Destabilizing | 0.81 | D | 0.73 | prob.delet. | N | 0.487030731 | None | None | N |
I/G | 0.8432 | likely_pathogenic | 0.8487 | pathogenic | -2.906 | Highly Destabilizing | 0.447 | N | 0.789 | deleterious | None | None | None | None | N |
I/H | 0.9264 | likely_pathogenic | 0.9347 | pathogenic | -2.606 | Highly Destabilizing | 0.992 | D | 0.845 | deleterious | None | None | None | None | N |
I/K | 0.9165 | likely_pathogenic | 0.9275 | pathogenic | -1.829 | Destabilizing | 0.85 | D | 0.807 | deleterious | None | None | None | None | N |
I/L | 0.1448 | likely_benign | 0.1383 | benign | -0.563 | Destabilizing | 0.099 | N | 0.475 | neutral | N | 0.501333049 | None | None | N |
I/M | 0.1154 | likely_benign | 0.1165 | benign | -0.69 | Destabilizing | 0.81 | D | 0.658 | neutral | N | 0.513038705 | None | None | N |
I/N | 0.8124 | likely_pathogenic | 0.8299 | pathogenic | -2.454 | Highly Destabilizing | 0.896 | D | 0.844 | deleterious | N | 0.513545684 | None | None | N |
I/P | 0.9081 | likely_pathogenic | 0.9213 | pathogenic | -1.134 | Destabilizing | 0.92 | D | 0.835 | deleterious | None | None | None | None | N |
I/Q | 0.9 | likely_pathogenic | 0.9041 | pathogenic | -2.119 | Highly Destabilizing | 0.92 | D | 0.847 | deleterious | None | None | None | None | N |
I/R | 0.8795 | likely_pathogenic | 0.8961 | pathogenic | -1.942 | Destabilizing | 0.92 | D | 0.843 | deleterious | None | None | None | None | N |
I/S | 0.5996 | likely_pathogenic | 0.6157 | pathogenic | -3.07 | Highly Destabilizing | 0.379 | N | 0.782 | deleterious | N | 0.508265765 | None | None | N |
I/T | 0.2664 | likely_benign | 0.2709 | benign | -2.588 | Highly Destabilizing | 0.549 | D | 0.765 | deleterious | N | 0.493542099 | None | None | N |
I/V | 0.0686 | likely_benign | 0.0657 | benign | -1.134 | Destabilizing | 0.001 | N | 0.198 | neutral | N | 0.401555631 | None | None | N |
I/W | 0.935 | likely_pathogenic | 0.9402 | pathogenic | -1.818 | Destabilizing | 0.992 | D | 0.829 | deleterious | None | None | None | None | N |
I/Y | 0.8324 | likely_pathogenic | 0.8483 | pathogenic | -1.512 | Destabilizing | 0.92 | D | 0.814 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.