Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27829 | 83710;83711;83712 | chr2:178562647;178562646;178562645 | chr2:179427374;179427373;179427372 |
N2AB | 26188 | 78787;78788;78789 | chr2:178562647;178562646;178562645 | chr2:179427374;179427373;179427372 |
N2A | 25261 | 76006;76007;76008 | chr2:178562647;178562646;178562645 | chr2:179427374;179427373;179427372 |
N2B | 18764 | 56515;56516;56517 | chr2:178562647;178562646;178562645 | chr2:179427374;179427373;179427372 |
Novex-1 | 18889 | 56890;56891;56892 | chr2:178562647;178562646;178562645 | chr2:179427374;179427373;179427372 |
Novex-2 | 18956 | 57091;57092;57093 | chr2:178562647;178562646;178562645 | chr2:179427374;179427373;179427372 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs374322635 | 0.467 | 0.27 | N | 0.276 | 0.079 | 0.119812018005 | gnomAD-2.1.1 | 8.48E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.84E-05 | 0 |
N/K | rs374322635 | 0.467 | 0.27 | N | 0.276 | 0.079 | 0.119812018005 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/K | rs374322635 | 0.467 | 0.27 | N | 0.276 | 0.079 | 0.119812018005 | gnomAD-4.0.0 | 1.38009E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80568E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1858 | likely_benign | 0.1667 | benign | -0.165 | Destabilizing | 0.495 | N | 0.321 | neutral | None | None | None | None | N |
N/C | 0.2469 | likely_benign | 0.2454 | benign | 0.251 | Stabilizing | 0.995 | D | 0.396 | neutral | None | None | None | None | N |
N/D | 0.1278 | likely_benign | 0.126 | benign | 0.136 | Stabilizing | 0.001 | N | 0.177 | neutral | N | 0.427952798 | None | None | N |
N/E | 0.2943 | likely_benign | 0.2895 | benign | 0.078 | Stabilizing | 0.176 | N | 0.279 | neutral | None | None | None | None | N |
N/F | 0.5007 | ambiguous | 0.492 | ambiguous | -0.693 | Destabilizing | 0.981 | D | 0.438 | neutral | None | None | None | None | N |
N/G | 0.1837 | likely_benign | 0.1697 | benign | -0.281 | Destabilizing | 0.495 | N | 0.299 | neutral | None | None | None | None | N |
N/H | 0.1051 | likely_benign | 0.1096 | benign | -0.292 | Destabilizing | 0.927 | D | 0.367 | neutral | N | 0.473001399 | None | None | N |
N/I | 0.2535 | likely_benign | 0.2457 | benign | 0.041 | Stabilizing | 0.927 | D | 0.453 | neutral | N | 0.495664785 | None | None | N |
N/K | 0.2323 | likely_benign | 0.2433 | benign | 0.147 | Stabilizing | 0.27 | N | 0.276 | neutral | N | 0.475093384 | None | None | N |
N/L | 0.2456 | likely_benign | 0.2356 | benign | 0.041 | Stabilizing | 0.704 | D | 0.419 | neutral | None | None | None | None | N |
N/M | 0.2757 | likely_benign | 0.2725 | benign | 0.211 | Stabilizing | 0.944 | D | 0.397 | neutral | None | None | None | None | N |
N/P | 0.4795 | ambiguous | 0.4122 | ambiguous | -0.004 | Destabilizing | 0.828 | D | 0.413 | neutral | None | None | None | None | N |
N/Q | 0.2417 | likely_benign | 0.2399 | benign | -0.252 | Destabilizing | 0.013 | N | 0.199 | neutral | None | None | None | None | N |
N/R | 0.3219 | likely_benign | 0.3295 | benign | 0.221 | Stabilizing | 0.543 | D | 0.281 | neutral | None | None | None | None | N |
N/S | 0.1002 | likely_benign | 0.0969 | benign | -0.018 | Destabilizing | 0.425 | N | 0.337 | neutral | N | 0.510206035 | None | None | N |
N/T | 0.1261 | likely_benign | 0.1221 | benign | 0.046 | Stabilizing | 0.425 | N | 0.264 | neutral | N | 0.471938216 | None | None | N |
N/V | 0.2466 | likely_benign | 0.2298 | benign | -0.004 | Destabilizing | 0.828 | D | 0.457 | neutral | None | None | None | None | N |
N/W | 0.7164 | likely_pathogenic | 0.7209 | pathogenic | -0.772 | Destabilizing | 0.995 | D | 0.443 | neutral | None | None | None | None | N |
N/Y | 0.1559 | likely_benign | 0.1586 | benign | -0.466 | Destabilizing | 0.975 | D | 0.407 | neutral | N | 0.495411295 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.