Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2783 | 8572;8573;8574 | chr2:178770445;178770444;178770443 | chr2:179635172;179635171;179635170 |
N2AB | 2783 | 8572;8573;8574 | chr2:178770445;178770444;178770443 | chr2:179635172;179635171;179635170 |
N2A | 2783 | 8572;8573;8574 | chr2:178770445;178770444;178770443 | chr2:179635172;179635171;179635170 |
N2B | 2737 | 8434;8435;8436 | chr2:178770445;178770444;178770443 | chr2:179635172;179635171;179635170 |
Novex-1 | 2737 | 8434;8435;8436 | chr2:178770445;178770444;178770443 | chr2:179635172;179635171;179635170 |
Novex-2 | 2737 | 8434;8435;8436 | chr2:178770445;178770444;178770443 | chr2:179635172;179635171;179635170 |
Novex-3 | 2783 | 8572;8573;8574 | chr2:178770445;178770444;178770443 | chr2:179635172;179635171;179635170 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | rs374375627 | -0.217 | 0.027 | N | 0.361 | 0.271 | 0.213573922156 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.45E-05 | None | 0 | None | 0 | 0 | 0 |
R/S | rs374375627 | -0.217 | 0.027 | N | 0.361 | 0.271 | 0.213573922156 | gnomAD-4.0.0 | 1.36815E-06 | None | None | None | None | N | None | 2.98686E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99292E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.3676 | ambiguous | 0.5634 | ambiguous | -0.095 | Destabilizing | 0.035 | N | 0.336 | neutral | None | None | None | None | N |
R/C | 0.2923 | likely_benign | 0.3689 | ambiguous | -0.461 | Destabilizing | 0.935 | D | 0.315 | neutral | None | None | None | None | N |
R/D | 0.5667 | likely_pathogenic | 0.7495 | pathogenic | -0.438 | Destabilizing | 0.149 | N | 0.406 | neutral | None | None | None | None | N |
R/E | 0.3754 | ambiguous | 0.5638 | ambiguous | -0.42 | Destabilizing | 0.035 | N | 0.305 | neutral | None | None | None | None | N |
R/F | 0.5633 | ambiguous | 0.7465 | pathogenic | -0.494 | Destabilizing | 0.791 | D | 0.339 | neutral | None | None | None | None | N |
R/G | 0.2085 | likely_benign | 0.3588 | ambiguous | -0.175 | Destabilizing | 0.117 | N | 0.39 | neutral | N | 0.505252455 | None | None | N |
R/H | 0.1302 | likely_benign | 0.1653 | benign | -0.67 | Destabilizing | 0.555 | D | 0.406 | neutral | None | None | None | None | N |
R/I | 0.2736 | likely_benign | 0.4662 | ambiguous | 0.068 | Stabilizing | 0.555 | D | 0.362 | neutral | None | None | None | None | N |
R/K | 0.0849 | likely_benign | 0.0972 | benign | -0.421 | Destabilizing | None | N | 0.183 | neutral | N | 0.368940553 | None | None | N |
R/L | 0.2564 | likely_benign | 0.4162 | ambiguous | 0.068 | Stabilizing | 0.149 | N | 0.39 | neutral | None | None | None | None | N |
R/M | 0.2607 | likely_benign | 0.4472 | ambiguous | -0.298 | Destabilizing | 0.741 | D | 0.375 | neutral | D | 0.535821858 | None | None | N |
R/N | 0.4068 | ambiguous | 0.5958 | pathogenic | -0.394 | Destabilizing | 0.149 | N | 0.361 | neutral | None | None | None | None | N |
R/P | 0.4241 | ambiguous | 0.5805 | pathogenic | 0.028 | Stabilizing | 0.262 | N | 0.395 | neutral | None | None | None | None | N |
R/Q | 0.1204 | likely_benign | 0.1474 | benign | -0.376 | Destabilizing | 0.081 | N | 0.383 | neutral | None | None | None | None | N |
R/S | 0.3709 | ambiguous | 0.5681 | pathogenic | -0.481 | Destabilizing | 0.027 | N | 0.361 | neutral | N | 0.517898234 | None | None | N |
R/T | 0.2428 | likely_benign | 0.4203 | ambiguous | -0.387 | Destabilizing | 0.117 | N | 0.385 | neutral | N | 0.517773665 | None | None | N |
R/V | 0.3779 | ambiguous | 0.5489 | ambiguous | 0.028 | Stabilizing | 0.149 | N | 0.413 | neutral | None | None | None | None | N |
R/W | 0.2382 | likely_benign | 0.3644 | ambiguous | -0.753 | Destabilizing | 0.915 | D | 0.319 | neutral | D | 0.535821858 | None | None | N |
R/Y | 0.4291 | ambiguous | 0.5995 | pathogenic | -0.383 | Destabilizing | 0.555 | D | 0.366 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.