Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27832 | 83719;83720;83721 | chr2:178562638;178562637;178562636 | chr2:179427365;179427364;179427363 |
N2AB | 26191 | 78796;78797;78798 | chr2:178562638;178562637;178562636 | chr2:179427365;179427364;179427363 |
N2A | 25264 | 76015;76016;76017 | chr2:178562638;178562637;178562636 | chr2:179427365;179427364;179427363 |
N2B | 18767 | 56524;56525;56526 | chr2:178562638;178562637;178562636 | chr2:179427365;179427364;179427363 |
Novex-1 | 18892 | 56899;56900;56901 | chr2:178562638;178562637;178562636 | chr2:179427365;179427364;179427363 |
Novex-2 | 18959 | 57100;57101;57102 | chr2:178562638;178562637;178562636 | chr2:179427365;179427364;179427363 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/V | rs746250521 | -0.16 | 0.704 | N | 0.481 | 0.371 | 0.504418060211 | gnomAD-2.1.1 | 4.21E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.76E-05 | None | 0 | None | 0 | 0 | 0 |
E/V | rs746250521 | -0.16 | 0.704 | N | 0.481 | 0.371 | 0.504418060211 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.9305E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/V | rs746250521 | -0.16 | 0.704 | N | 0.481 | 0.371 | 0.504418060211 | gnomAD-4.0.0 | 6.57203E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.9305E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1948 | likely_benign | 0.2352 | benign | -0.366 | Destabilizing | 0.007 | N | 0.287 | neutral | N | 0.500509117 | None | None | N |
E/C | 0.9368 | likely_pathogenic | 0.9553 | pathogenic | 0.012 | Stabilizing | 0.987 | D | 0.663 | neutral | None | None | None | None | N |
E/D | 0.4081 | ambiguous | 0.4684 | ambiguous | -0.352 | Destabilizing | 0.221 | N | 0.532 | neutral | N | 0.513301741 | None | None | N |
E/F | 0.9516 | likely_pathogenic | 0.9685 | pathogenic | -0.279 | Destabilizing | 0.975 | D | 0.641 | neutral | None | None | None | None | N |
E/G | 0.3643 | ambiguous | 0.455 | ambiguous | -0.568 | Destabilizing | 0.786 | D | 0.503 | neutral | N | 0.498413489 | None | None | N |
E/H | 0.8428 | likely_pathogenic | 0.8864 | pathogenic | -0.108 | Destabilizing | 0.99 | D | 0.495 | neutral | None | None | None | None | N |
E/I | 0.615 | likely_pathogenic | 0.6507 | pathogenic | 0.13 | Stabilizing | 0.899 | D | 0.63 | neutral | None | None | None | None | N |
E/K | 0.3981 | ambiguous | 0.4719 | ambiguous | 0.333 | Stabilizing | 0.671 | D | 0.548 | neutral | N | 0.494183527 | None | None | N |
E/L | 0.7145 | likely_pathogenic | 0.7813 | pathogenic | 0.13 | Stabilizing | 0.816 | D | 0.549 | neutral | None | None | None | None | N |
E/M | 0.7141 | likely_pathogenic | 0.763 | pathogenic | 0.258 | Stabilizing | 0.974 | D | 0.563 | neutral | None | None | None | None | N |
E/N | 0.6299 | likely_pathogenic | 0.6737 | pathogenic | 0.054 | Stabilizing | 0.893 | D | 0.525 | neutral | None | None | None | None | N |
E/P | 0.494 | ambiguous | 0.5679 | pathogenic | -0.015 | Destabilizing | 0.728 | D | 0.492 | neutral | None | None | None | None | N |
E/Q | 0.2638 | likely_benign | 0.3119 | benign | 0.079 | Stabilizing | 0.208 | N | 0.323 | neutral | N | 0.466951466 | None | None | N |
E/R | 0.5846 | likely_pathogenic | 0.6594 | pathogenic | 0.509 | Stabilizing | 0.95 | D | 0.526 | neutral | None | None | None | None | N |
E/S | 0.4104 | ambiguous | 0.4715 | ambiguous | -0.123 | Destabilizing | 0.594 | D | 0.513 | neutral | None | None | None | None | N |
E/T | 0.4589 | ambiguous | 0.5072 | ambiguous | 0.04 | Stabilizing | 0.801 | D | 0.431 | neutral | None | None | None | None | N |
E/V | 0.3749 | ambiguous | 0.4188 | ambiguous | -0.015 | Destabilizing | 0.704 | D | 0.481 | neutral | N | 0.492728724 | None | None | N |
E/W | 0.9855 | likely_pathogenic | 0.9915 | pathogenic | -0.137 | Destabilizing | 0.999 | D | 0.675 | neutral | None | None | None | None | N |
E/Y | 0.9088 | likely_pathogenic | 0.9403 | pathogenic | -0.033 | Destabilizing | 0.997 | D | 0.583 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.