Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27834 | 83725;83726;83727 | chr2:178562632;178562631;178562630 | chr2:179427359;179427358;179427357 |
N2AB | 26193 | 78802;78803;78804 | chr2:178562632;178562631;178562630 | chr2:179427359;179427358;179427357 |
N2A | 25266 | 76021;76022;76023 | chr2:178562632;178562631;178562630 | chr2:179427359;179427358;179427357 |
N2B | 18769 | 56530;56531;56532 | chr2:178562632;178562631;178562630 | chr2:179427359;179427358;179427357 |
Novex-1 | 18894 | 56905;56906;56907 | chr2:178562632;178562631;178562630 | chr2:179427359;179427358;179427357 |
Novex-2 | 18961 | 57106;57107;57108 | chr2:178562632;178562631;178562630 | chr2:179427359;179427358;179427357 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | None | None | 0.988 | N | 0.442 | 0.324 | 0.645752913984 | gnomAD-4.0.0 | 6.87609E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.18824E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.2606 | likely_benign | 0.2644 | benign | -1.835 | Destabilizing | 0.113 | N | 0.228 | neutral | None | None | None | None | N |
C/D | 0.625 | likely_pathogenic | 0.6687 | pathogenic | -0.264 | Destabilizing | 0.115 | N | 0.341 | neutral | None | None | None | None | N |
C/E | 0.7519 | likely_pathogenic | 0.7899 | pathogenic | -0.159 | Destabilizing | 0.011 | N | 0.206 | neutral | None | None | None | None | N |
C/F | 0.1871 | likely_benign | 0.2034 | benign | -1.167 | Destabilizing | 0.964 | D | 0.457 | neutral | N | 0.479900706 | None | None | N |
C/G | 0.1273 | likely_benign | 0.1266 | benign | -2.144 | Highly Destabilizing | None | N | 0.15 | neutral | N | 0.422203049 | None | None | N |
C/H | 0.4022 | ambiguous | 0.451 | ambiguous | -2.025 | Highly Destabilizing | 0.931 | D | 0.465 | neutral | None | None | None | None | N |
C/I | 0.3951 | ambiguous | 0.4088 | ambiguous | -1.036 | Destabilizing | 0.911 | D | 0.453 | neutral | None | None | None | None | N |
C/K | 0.7086 | likely_pathogenic | 0.7672 | pathogenic | -0.961 | Destabilizing | 0.511 | D | 0.357 | neutral | None | None | None | None | N |
C/L | 0.3656 | ambiguous | 0.3823 | ambiguous | -1.036 | Destabilizing | 0.676 | D | 0.333 | neutral | None | None | None | None | N |
C/M | 0.4815 | ambiguous | 0.4895 | ambiguous | -0.111 | Destabilizing | 0.991 | D | 0.419 | neutral | None | None | None | None | N |
C/N | 0.2689 | likely_benign | 0.2854 | benign | -0.951 | Destabilizing | 0.002 | N | 0.206 | neutral | None | None | None | None | N |
C/P | 0.9657 | likely_pathogenic | 0.9695 | pathogenic | -1.277 | Destabilizing | 0.56 | D | 0.471 | neutral | None | None | None | None | N |
C/Q | 0.4861 | ambiguous | 0.5417 | ambiguous | -0.853 | Destabilizing | 0.654 | D | 0.476 | neutral | None | None | None | None | N |
C/R | 0.4366 | ambiguous | 0.5176 | ambiguous | -0.793 | Destabilizing | 0.792 | D | 0.487 | neutral | N | 0.444191687 | None | None | N |
C/S | 0.1548 | likely_benign | 0.1632 | benign | -1.546 | Destabilizing | 0.006 | N | 0.155 | neutral | N | 0.439689944 | None | None | N |
C/T | 0.3013 | likely_benign | 0.3146 | benign | -1.253 | Destabilizing | 0.218 | N | 0.335 | neutral | None | None | None | None | N |
C/V | 0.3352 | likely_benign | 0.3326 | benign | -1.277 | Destabilizing | 0.654 | D | 0.346 | neutral | None | None | None | None | N |
C/W | 0.54 | ambiguous | 0.5833 | pathogenic | -1.121 | Destabilizing | 0.997 | D | 0.414 | neutral | N | 0.468797891 | None | None | N |
C/Y | 0.2496 | likely_benign | 0.2947 | benign | -1.131 | Destabilizing | 0.988 | D | 0.442 | neutral | N | 0.468544401 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.