Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27840 | 83743;83744;83745 | chr2:178562614;178562613;178562612 | chr2:179427341;179427340;179427339 |
N2AB | 26199 | 78820;78821;78822 | chr2:178562614;178562613;178562612 | chr2:179427341;179427340;179427339 |
N2A | 25272 | 76039;76040;76041 | chr2:178562614;178562613;178562612 | chr2:179427341;179427340;179427339 |
N2B | 18775 | 56548;56549;56550 | chr2:178562614;178562613;178562612 | chr2:179427341;179427340;179427339 |
Novex-1 | 18900 | 56923;56924;56925 | chr2:178562614;178562613;178562612 | chr2:179427341;179427340;179427339 |
Novex-2 | 18967 | 57124;57125;57126 | chr2:178562614;178562613;178562612 | chr2:179427341;179427340;179427339 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs752446232 | -2.999 | 1.0 | D | 0.623 | 0.837 | 0.818476300364 | gnomAD-2.1.1 | 2.04E-05 | None | None | None | None | N | None | 0 | 1.47955E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/A | rs752446232 | -2.999 | 1.0 | D | 0.623 | 0.837 | 0.818476300364 | gnomAD-4.0.0 | 9.60344E-06 | None | None | None | None | N | None | 0 | 1.39121E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | None | None | 0.998 | D | 0.597 | 0.422 | 0.708727380244 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9401 | likely_pathogenic | 0.9291 | pathogenic | -2.837 | Highly Destabilizing | 1.0 | D | 0.623 | neutral | D | 0.565646172 | None | None | N |
V/C | 0.9749 | likely_pathogenic | 0.9702 | pathogenic | -2.247 | Highly Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
V/D | 0.9994 | likely_pathogenic | 0.9993 | pathogenic | -3.726 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | D | 0.652235802 | None | None | N |
V/E | 0.9979 | likely_pathogenic | 0.9975 | pathogenic | -3.424 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
V/F | 0.9426 | likely_pathogenic | 0.9351 | pathogenic | -1.682 | Destabilizing | 1.0 | D | 0.801 | deleterious | D | 0.572229538 | None | None | N |
V/G | 0.9691 | likely_pathogenic | 0.9625 | pathogenic | -3.385 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | D | 0.652235802 | None | None | N |
V/H | 0.9993 | likely_pathogenic | 0.9992 | pathogenic | -3.073 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
V/I | 0.1061 | likely_benign | 0.1025 | benign | -1.212 | Destabilizing | 0.998 | D | 0.597 | neutral | D | 0.526387075 | None | None | N |
V/K | 0.9984 | likely_pathogenic | 0.9982 | pathogenic | -2.483 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
V/L | 0.7642 | likely_pathogenic | 0.7326 | pathogenic | -1.212 | Destabilizing | 0.995 | D | 0.636 | neutral | D | 0.527356839 | None | None | N |
V/M | 0.8634 | likely_pathogenic | 0.8371 | pathogenic | -1.46 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
V/N | 0.9969 | likely_pathogenic | 0.9963 | pathogenic | -3.162 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
V/P | 0.9977 | likely_pathogenic | 0.9974 | pathogenic | -1.742 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
V/Q | 0.9976 | likely_pathogenic | 0.9972 | pathogenic | -2.842 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
V/R | 0.9967 | likely_pathogenic | 0.9964 | pathogenic | -2.415 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
V/S | 0.9864 | likely_pathogenic | 0.9832 | pathogenic | -3.622 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
V/T | 0.9597 | likely_pathogenic | 0.9511 | pathogenic | -3.182 | Highly Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
V/W | 0.9995 | likely_pathogenic | 0.9994 | pathogenic | -2.154 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
V/Y | 0.996 | likely_pathogenic | 0.9955 | pathogenic | -1.977 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.