Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27846 | 83761;83762;83763 | chr2:178562596;178562595;178562594 | chr2:179427323;179427322;179427321 |
N2AB | 26205 | 78838;78839;78840 | chr2:178562596;178562595;178562594 | chr2:179427323;179427322;179427321 |
N2A | 25278 | 76057;76058;76059 | chr2:178562596;178562595;178562594 | chr2:179427323;179427322;179427321 |
N2B | 18781 | 56566;56567;56568 | chr2:178562596;178562595;178562594 | chr2:179427323;179427322;179427321 |
Novex-1 | 18906 | 56941;56942;56943 | chr2:178562596;178562595;178562594 | chr2:179427323;179427322;179427321 |
Novex-2 | 18973 | 57142;57143;57144 | chr2:178562596;178562595;178562594 | chr2:179427323;179427322;179427321 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 0.976 | N | 0.549 | 0.297 | 0.475272412942 | gnomAD-4.0.0 | 1.37125E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80047E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8443 | likely_pathogenic | 0.8812 | pathogenic | -0.686 | Destabilizing | 0.118 | N | 0.551 | neutral | None | None | None | None | I |
Y/C | 0.3515 | ambiguous | 0.4181 | ambiguous | 0.091 | Stabilizing | 0.976 | D | 0.549 | neutral | N | 0.468557628 | None | None | I |
Y/D | 0.8821 | likely_pathogenic | 0.9121 | pathogenic | 0.972 | Stabilizing | 0.777 | D | 0.568 | neutral | N | 0.485772829 | None | None | I |
Y/E | 0.952 | likely_pathogenic | 0.9629 | pathogenic | 0.948 | Stabilizing | 0.393 | N | 0.571 | neutral | None | None | None | None | I |
Y/F | 0.0881 | likely_benign | 0.1072 | benign | -0.397 | Destabilizing | None | N | 0.305 | neutral | N | 0.460260004 | None | None | I |
Y/G | 0.8661 | likely_pathogenic | 0.8913 | pathogenic | -0.866 | Destabilizing | 0.568 | D | 0.591 | neutral | None | None | None | None | I |
Y/H | 0.4622 | ambiguous | 0.5484 | ambiguous | 0.207 | Stabilizing | 0.001 | N | 0.315 | neutral | N | 0.474367298 | None | None | I |
Y/I | 0.6193 | likely_pathogenic | 0.6697 | pathogenic | -0.241 | Destabilizing | 0.005 | N | 0.479 | neutral | None | None | None | None | I |
Y/K | 0.9479 | likely_pathogenic | 0.9555 | pathogenic | 0.257 | Stabilizing | 0.073 | N | 0.567 | neutral | None | None | None | None | I |
Y/L | 0.6324 | likely_pathogenic | 0.6801 | pathogenic | -0.241 | Destabilizing | None | N | 0.224 | neutral | None | None | None | None | I |
Y/M | 0.7337 | likely_pathogenic | 0.7875 | pathogenic | -0.063 | Destabilizing | 0.406 | N | 0.513 | neutral | None | None | None | None | I |
Y/N | 0.4766 | ambiguous | 0.5383 | ambiguous | 0.087 | Stabilizing | 0.632 | D | 0.579 | neutral | N | 0.519209521 | None | None | I |
Y/P | 0.9911 | likely_pathogenic | 0.9931 | pathogenic | -0.369 | Destabilizing | 0.934 | D | 0.555 | neutral | None | None | None | None | I |
Y/Q | 0.8994 | likely_pathogenic | 0.9229 | pathogenic | 0.108 | Stabilizing | 0.406 | N | 0.529 | neutral | None | None | None | None | I |
Y/R | 0.9119 | likely_pathogenic | 0.9243 | pathogenic | 0.539 | Stabilizing | 0.485 | N | 0.579 | neutral | None | None | None | None | I |
Y/S | 0.7461 | likely_pathogenic | 0.7997 | pathogenic | -0.378 | Destabilizing | 0.329 | N | 0.587 | neutral | N | 0.470657541 | None | None | I |
Y/T | 0.8661 | likely_pathogenic | 0.9005 | pathogenic | -0.31 | Destabilizing | 0.393 | N | 0.553 | neutral | None | None | None | None | I |
Y/V | 0.5833 | likely_pathogenic | 0.6244 | pathogenic | -0.369 | Destabilizing | 0.002 | N | 0.249 | neutral | None | None | None | None | I |
Y/W | 0.6067 | likely_pathogenic | 0.6729 | pathogenic | -0.515 | Destabilizing | 0.887 | D | 0.443 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.