Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27848 | 83767;83768;83769 | chr2:178562590;178562589;178562588 | chr2:179427317;179427316;179427315 |
N2AB | 26207 | 78844;78845;78846 | chr2:178562590;178562589;178562588 | chr2:179427317;179427316;179427315 |
N2A | 25280 | 76063;76064;76065 | chr2:178562590;178562589;178562588 | chr2:179427317;179427316;179427315 |
N2B | 18783 | 56572;56573;56574 | chr2:178562590;178562589;178562588 | chr2:179427317;179427316;179427315 |
Novex-1 | 18908 | 56947;56948;56949 | chr2:178562590;178562589;178562588 | chr2:179427317;179427316;179427315 |
Novex-2 | 18975 | 57148;57149;57150 | chr2:178562590;178562589;178562588 | chr2:179427317;179427316;179427315 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs397517723 | -0.433 | 0.003 | N | 0.465 | 0.118 | 0.52170519339 | gnomAD-2.1.1 | 1.22E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.68E-05 | 0 |
I/T | rs397517723 | -0.433 | 0.003 | N | 0.465 | 0.118 | 0.52170519339 | gnomAD-4.0.0 | 4.11295E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.4013E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1816 | likely_benign | 0.1998 | benign | -0.765 | Destabilizing | None | N | 0.317 | neutral | None | None | None | None | I |
I/C | 0.5778 | likely_pathogenic | 0.6162 | pathogenic | -0.869 | Destabilizing | 0.32 | N | 0.529 | neutral | None | None | None | None | I |
I/D | 0.7096 | likely_pathogenic | 0.7685 | pathogenic | 0.558 | Stabilizing | 0.32 | N | 0.55 | neutral | None | None | None | None | I |
I/E | 0.5891 | likely_pathogenic | 0.6478 | pathogenic | 0.513 | Stabilizing | 0.047 | N | 0.56 | neutral | None | None | None | None | I |
I/F | 0.1753 | likely_benign | 0.2069 | benign | -0.618 | Destabilizing | 0.02 | N | 0.475 | neutral | N | 0.515921286 | None | None | I |
I/G | 0.5779 | likely_pathogenic | 0.6236 | pathogenic | -0.962 | Destabilizing | 0.032 | N | 0.524 | neutral | None | None | None | None | I |
I/H | 0.5651 | likely_pathogenic | 0.6299 | pathogenic | -0.216 | Destabilizing | 0.692 | D | 0.553 | neutral | None | None | None | None | I |
I/K | 0.4662 | ambiguous | 0.5548 | ambiguous | -0.167 | Destabilizing | 0.002 | N | 0.529 | neutral | None | None | None | None | I |
I/L | 0.1171 | likely_benign | 0.1296 | benign | -0.352 | Destabilizing | None | N | 0.243 | neutral | N | 0.476536179 | None | None | I |
I/M | 0.1089 | likely_benign | 0.1136 | benign | -0.464 | Destabilizing | None | N | 0.251 | neutral | N | 0.510958184 | None | None | I |
I/N | 0.3158 | likely_benign | 0.3635 | ambiguous | -0.029 | Destabilizing | 0.262 | N | 0.559 | neutral | D | 0.522961902 | None | None | I |
I/P | 0.4284 | ambiguous | 0.4704 | ambiguous | -0.457 | Destabilizing | 0.32 | N | 0.549 | neutral | None | None | None | None | I |
I/Q | 0.4676 | ambiguous | 0.5166 | ambiguous | -0.167 | Destabilizing | 0.163 | N | 0.559 | neutral | None | None | None | None | I |
I/R | 0.3476 | ambiguous | 0.4298 | ambiguous | 0.228 | Stabilizing | 0.158 | N | 0.549 | neutral | None | None | None | None | I |
I/S | 0.2408 | likely_benign | 0.2713 | benign | -0.693 | Destabilizing | 0.024 | N | 0.519 | neutral | N | 0.510822111 | None | None | I |
I/T | 0.0951 | likely_benign | 0.1092 | benign | -0.615 | Destabilizing | 0.003 | N | 0.465 | neutral | N | 0.494929939 | None | None | I |
I/V | 0.0553 | likely_benign | 0.061 | benign | -0.457 | Destabilizing | None | N | 0.193 | neutral | N | 0.420856254 | None | None | I |
I/W | 0.7852 | likely_pathogenic | 0.8065 | pathogenic | -0.582 | Destabilizing | 0.89 | D | 0.559 | neutral | None | None | None | None | I |
I/Y | 0.538 | ambiguous | 0.5966 | pathogenic | -0.326 | Destabilizing | 0.021 | N | 0.529 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.