Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27852 | 83779;83780;83781 | chr2:178562578;178562577;178562576 | chr2:179427305;179427304;179427303 |
N2AB | 26211 | 78856;78857;78858 | chr2:178562578;178562577;178562576 | chr2:179427305;179427304;179427303 |
N2A | 25284 | 76075;76076;76077 | chr2:178562578;178562577;178562576 | chr2:179427305;179427304;179427303 |
N2B | 18787 | 56584;56585;56586 | chr2:178562578;178562577;178562576 | chr2:179427305;179427304;179427303 |
Novex-1 | 18912 | 56959;56960;56961 | chr2:178562578;178562577;178562576 | chr2:179427305;179427304;179427303 |
Novex-2 | 18979 | 57160;57161;57162 | chr2:178562578;178562577;178562576 | chr2:179427305;179427304;179427303 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | None | None | 0.996 | N | 0.758 | 0.435 | 0.616786663822 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/D | None | None | 0.996 | N | 0.758 | 0.435 | 0.616786663822 | gnomAD-4.0.0 | 6.57315E-06 | None | None | None | None | I | None | 2.41278E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/G | rs541476378 | None | 0.873 | N | 0.581 | 0.255 | 0.280987212366 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3749 | ambiguous | 0.356 | ambiguous | -1.127 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
A/D | 0.7798 | likely_pathogenic | 0.7275 | pathogenic | -1.873 | Destabilizing | 0.996 | D | 0.758 | deleterious | N | 0.491924894 | None | None | I |
A/E | 0.59 | likely_pathogenic | 0.555 | ambiguous | -1.847 | Destabilizing | 0.998 | D | 0.713 | prob.delet. | None | None | None | None | I |
A/F | 0.5191 | ambiguous | 0.4894 | ambiguous | -1.07 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
A/G | 0.1889 | likely_benign | 0.1982 | benign | -1.522 | Destabilizing | 0.873 | D | 0.581 | neutral | N | 0.468033741 | None | None | I |
A/H | 0.7449 | likely_pathogenic | 0.6989 | pathogenic | -1.718 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
A/I | 0.2614 | likely_benign | 0.2513 | benign | -0.448 | Destabilizing | 0.998 | D | 0.742 | deleterious | None | None | None | None | I |
A/K | 0.7077 | likely_pathogenic | 0.6754 | pathogenic | -1.59 | Destabilizing | 0.999 | D | 0.716 | prob.delet. | None | None | None | None | I |
A/L | 0.2757 | likely_benign | 0.2613 | benign | -0.448 | Destabilizing | 0.994 | D | 0.627 | neutral | None | None | None | None | I |
A/M | 0.2564 | likely_benign | 0.2534 | benign | -0.4 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
A/N | 0.5752 | likely_pathogenic | 0.5251 | ambiguous | -1.412 | Destabilizing | 0.975 | D | 0.773 | deleterious | None | None | None | None | I |
A/P | 0.9528 | likely_pathogenic | 0.9524 | pathogenic | -0.658 | Destabilizing | 0.998 | D | 0.748 | deleterious | N | 0.491417915 | None | None | I |
A/Q | 0.5368 | ambiguous | 0.511 | ambiguous | -1.511 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
A/R | 0.6109 | likely_pathogenic | 0.586 | pathogenic | -1.25 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | I |
A/S | 0.1277 | likely_benign | 0.1151 | benign | -1.761 | Destabilizing | 0.722 | D | 0.557 | neutral | N | 0.398002745 | None | None | I |
A/T | 0.0999 | likely_benign | 0.0971 | benign | -1.644 | Destabilizing | 0.25 | N | 0.387 | neutral | N | 0.488115822 | None | None | I |
A/V | 0.1165 | likely_benign | 0.1146 | benign | -0.658 | Destabilizing | 0.98 | D | 0.577 | neutral | N | 0.499063535 | None | None | I |
A/W | 0.8943 | likely_pathogenic | 0.8766 | pathogenic | -1.523 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | I |
A/Y | 0.7162 | likely_pathogenic | 0.6808 | pathogenic | -1.115 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.