Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27855 | 83788;83789;83790 | chr2:178562569;178562568;178562567 | chr2:179427296;179427295;179427294 |
N2AB | 26214 | 78865;78866;78867 | chr2:178562569;178562568;178562567 | chr2:179427296;179427295;179427294 |
N2A | 25287 | 76084;76085;76086 | chr2:178562569;178562568;178562567 | chr2:179427296;179427295;179427294 |
N2B | 18790 | 56593;56594;56595 | chr2:178562569;178562568;178562567 | chr2:179427296;179427295;179427294 |
Novex-1 | 18915 | 56968;56969;56970 | chr2:178562569;178562568;178562567 | chr2:179427296;179427295;179427294 |
Novex-2 | 18982 | 57169;57170;57171 | chr2:178562569;178562568;178562567 | chr2:179427296;179427295;179427294 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1268315067 | 0.101 | 0.026 | N | 0.519 | 0.044 | 0.18274738541 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | I | None | 1.14732E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs1268315067 | 0.101 | 0.026 | N | 0.519 | 0.044 | 0.18274738541 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs1268315067 | 0.101 | 0.026 | N | 0.519 | 0.044 | 0.18274738541 | gnomAD-4.0.0 | 1.8624E-06 | None | None | None | None | I | None | 4.01263E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0538 | likely_benign | 0.0559 | benign | -0.181 | Destabilizing | None | N | 0.076 | neutral | N | 0.444479688 | None | None | I |
T/C | 0.245 | likely_benign | 0.2571 | benign | -0.426 | Destabilizing | 0.492 | N | 0.388 | neutral | None | None | None | None | I |
T/D | 0.2152 | likely_benign | 0.2132 | benign | 0.046 | Stabilizing | 0.018 | N | 0.461 | neutral | None | None | None | None | I |
T/E | 0.1711 | likely_benign | 0.1715 | benign | -0.037 | Destabilizing | 0.018 | N | 0.469 | neutral | None | None | None | None | I |
T/F | 0.1564 | likely_benign | 0.1668 | benign | -0.849 | Destabilizing | 0.204 | N | 0.58 | neutral | None | None | None | None | I |
T/G | 0.1079 | likely_benign | 0.1093 | benign | -0.245 | Destabilizing | 0.007 | N | 0.418 | neutral | None | None | None | None | I |
T/H | 0.1726 | likely_benign | 0.178 | benign | -0.343 | Destabilizing | 0.204 | N | 0.469 | neutral | None | None | None | None | I |
T/I | 0.0802 | likely_benign | 0.0856 | benign | -0.136 | Destabilizing | 0.026 | N | 0.519 | neutral | N | 0.513395482 | None | None | I |
T/K | 0.1086 | likely_benign | 0.1132 | benign | -0.276 | Destabilizing | None | N | 0.192 | neutral | N | 0.44282625 | None | None | I |
T/L | 0.0575 | likely_benign | 0.0594 | benign | -0.136 | Destabilizing | 0.007 | N | 0.459 | neutral | None | None | None | None | I |
T/M | 0.0673 | likely_benign | 0.071 | benign | -0.268 | Destabilizing | 0.204 | N | 0.405 | neutral | None | None | None | None | I |
T/N | 0.0805 | likely_benign | 0.0828 | benign | -0.129 | Destabilizing | 0.018 | N | 0.274 | neutral | None | None | None | None | I |
T/P | 0.0646 | likely_benign | 0.0662 | benign | -0.127 | Destabilizing | None | N | 0.115 | neutral | N | 0.467953981 | None | None | I |
T/Q | 0.1289 | likely_benign | 0.1337 | benign | -0.304 | Destabilizing | 0.06 | N | 0.519 | neutral | None | None | None | None | I |
T/R | 0.1101 | likely_benign | 0.1175 | benign | 0.028 | Stabilizing | 0.013 | N | 0.513 | neutral | N | 0.467401858 | None | None | I |
T/S | 0.0735 | likely_benign | 0.0739 | benign | -0.285 | Destabilizing | None | N | 0.073 | neutral | N | 0.39099192 | None | None | I |
T/V | 0.0675 | likely_benign | 0.072 | benign | -0.127 | Destabilizing | 0.018 | N | 0.294 | neutral | None | None | None | None | I |
T/W | 0.4361 | ambiguous | 0.4545 | ambiguous | -0.952 | Destabilizing | 0.747 | D | 0.525 | neutral | None | None | None | None | I |
T/Y | 0.2112 | likely_benign | 0.218 | benign | -0.62 | Destabilizing | 0.204 | N | 0.554 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.