Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27857 | 83794;83795;83796 | chr2:178562563;178562562;178562561 | chr2:179427290;179427289;179427288 |
N2AB | 26216 | 78871;78872;78873 | chr2:178562563;178562562;178562561 | chr2:179427290;179427289;179427288 |
N2A | 25289 | 76090;76091;76092 | chr2:178562563;178562562;178562561 | chr2:179427290;179427289;179427288 |
N2B | 18792 | 56599;56600;56601 | chr2:178562563;178562562;178562561 | chr2:179427290;179427289;179427288 |
Novex-1 | 18917 | 56974;56975;56976 | chr2:178562563;178562562;178562561 | chr2:179427290;179427289;179427288 |
Novex-2 | 18984 | 57175;57176;57177 | chr2:178562563;178562562;178562561 | chr2:179427290;179427289;179427288 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.002 | N | 0.229 | 0.092 | 0.1749357433 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
P/L | None | None | 0.651 | N | 0.671 | 0.317 | 0.480423546575 | gnomAD-4.0.0 | 6.85636E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00383E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.068 | likely_benign | 0.0645 | benign | -1.106 | Destabilizing | 0.002 | N | 0.229 | neutral | N | 0.445746338 | None | None | N |
P/C | 0.5472 | ambiguous | 0.5209 | ambiguous | -0.717 | Destabilizing | 0.995 | D | 0.717 | prob.delet. | None | None | None | None | N |
P/D | 0.8532 | likely_pathogenic | 0.8391 | pathogenic | -0.452 | Destabilizing | 0.712 | D | 0.556 | neutral | None | None | None | None | N |
P/E | 0.6509 | likely_pathogenic | 0.6181 | pathogenic | -0.485 | Destabilizing | 0.553 | D | 0.537 | neutral | None | None | None | None | N |
P/F | 0.7317 | likely_pathogenic | 0.7133 | pathogenic | -0.915 | Destabilizing | 0.982 | D | 0.719 | prob.delet. | None | None | None | None | N |
P/G | 0.3763 | ambiguous | 0.3374 | benign | -1.375 | Destabilizing | 0.553 | D | 0.602 | neutral | None | None | None | None | N |
P/H | 0.5288 | ambiguous | 0.5081 | ambiguous | -0.841 | Destabilizing | 0.98 | D | 0.633 | neutral | N | 0.480693493 | None | None | N |
P/I | 0.4824 | ambiguous | 0.4749 | ambiguous | -0.495 | Destabilizing | 0.897 | D | 0.731 | deleterious | None | None | None | None | N |
P/K | 0.7273 | likely_pathogenic | 0.7149 | pathogenic | -0.747 | Destabilizing | 0.553 | D | 0.558 | neutral | None | None | None | None | N |
P/L | 0.2533 | likely_benign | 0.2526 | benign | -0.495 | Destabilizing | 0.651 | D | 0.671 | prob.neutral | N | 0.472082211 | None | None | N |
P/M | 0.4083 | ambiguous | 0.3888 | ambiguous | -0.38 | Destabilizing | 0.982 | D | 0.635 | neutral | None | None | None | None | N |
P/N | 0.6211 | likely_pathogenic | 0.5864 | pathogenic | -0.496 | Destabilizing | 0.946 | D | 0.669 | prob.neutral | None | None | None | None | N |
P/Q | 0.4258 | ambiguous | 0.3894 | ambiguous | -0.676 | Destabilizing | 0.088 | N | 0.339 | neutral | None | None | None | None | N |
P/R | 0.5902 | likely_pathogenic | 0.584 | pathogenic | -0.262 | Destabilizing | 0.868 | D | 0.685 | prob.delet. | N | 0.503317198 | None | None | N |
P/S | 0.1921 | likely_benign | 0.1763 | benign | -1.053 | Destabilizing | 0.483 | N | 0.545 | neutral | N | 0.477282753 | None | None | N |
P/T | 0.18 | likely_benign | 0.1718 | benign | -0.973 | Destabilizing | 0.651 | D | 0.521 | neutral | N | 0.477197546 | None | None | N |
P/V | 0.3105 | likely_benign | 0.2986 | benign | -0.662 | Destabilizing | 0.553 | D | 0.633 | neutral | None | None | None | None | N |
P/W | 0.8771 | likely_pathogenic | 0.8661 | pathogenic | -1.038 | Destabilizing | 0.995 | D | 0.729 | deleterious | None | None | None | None | N |
P/Y | 0.7199 | likely_pathogenic | 0.7144 | pathogenic | -0.737 | Destabilizing | 0.982 | D | 0.719 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.