Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27860 | 83803;83804;83805 | chr2:178562554;178562553;178562552 | chr2:179427281;179427280;179427279 |
N2AB | 26219 | 78880;78881;78882 | chr2:178562554;178562553;178562552 | chr2:179427281;179427280;179427279 |
N2A | 25292 | 76099;76100;76101 | chr2:178562554;178562553;178562552 | chr2:179427281;179427280;179427279 |
N2B | 18795 | 56608;56609;56610 | chr2:178562554;178562553;178562552 | chr2:179427281;179427280;179427279 |
Novex-1 | 18920 | 56983;56984;56985 | chr2:178562554;178562553;178562552 | chr2:179427281;179427280;179427279 |
Novex-2 | 18987 | 57184;57185;57186 | chr2:178562554;178562553;178562552 | chr2:179427281;179427280;179427279 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | None | N | 0.369 | 0.086 | 0.112648838833 | gnomAD-4.0.0 | 1.60069E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86885E-06 | 0 | 0 |
V/L | None | None | 0.026 | N | 0.522 | 0.108 | 0.294918367191 | gnomAD-4.0.0 | 3.19862E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.73549E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.176 | likely_benign | 0.159 | benign | -2.311 | Highly Destabilizing | None | N | 0.369 | neutral | N | 0.398187251 | None | None | N |
V/C | 0.838 | likely_pathogenic | 0.8137 | pathogenic | -2.36 | Highly Destabilizing | 0.823 | D | 0.674 | prob.neutral | None | None | None | None | N |
V/D | 0.9756 | likely_pathogenic | 0.9762 | pathogenic | -3.162 | Highly Destabilizing | 0.378 | N | 0.809 | deleterious | None | None | None | None | N |
V/E | 0.9671 | likely_pathogenic | 0.9658 | pathogenic | -2.982 | Highly Destabilizing | 0.314 | N | 0.7 | prob.delet. | N | 0.475667063 | None | None | N |
V/F | 0.7566 | likely_pathogenic | 0.7464 | pathogenic | -1.408 | Destabilizing | 0.552 | D | 0.692 | prob.delet. | None | None | None | None | N |
V/G | 0.528 | ambiguous | 0.5196 | ambiguous | -2.785 | Highly Destabilizing | 0.061 | N | 0.765 | deleterious | N | 0.490540052 | None | None | N |
V/H | 0.988 | likely_pathogenic | 0.9869 | pathogenic | -2.247 | Highly Destabilizing | 0.934 | D | 0.793 | deleterious | None | None | None | None | N |
V/I | 0.1232 | likely_benign | 0.1114 | benign | -0.998 | Destabilizing | 0.002 | N | 0.327 | neutral | None | None | None | None | N |
V/K | 0.9829 | likely_pathogenic | 0.9834 | pathogenic | -1.902 | Destabilizing | 0.378 | N | 0.711 | prob.delet. | None | None | None | None | N |
V/L | 0.5612 | ambiguous | 0.5119 | ambiguous | -0.998 | Destabilizing | 0.026 | N | 0.522 | neutral | N | 0.452845669 | None | None | N |
V/M | 0.5111 | ambiguous | 0.4886 | ambiguous | -1.362 | Destabilizing | 0.481 | N | 0.599 | neutral | N | 0.461083937 | None | None | N |
V/N | 0.8796 | likely_pathogenic | 0.8783 | pathogenic | -2.244 | Highly Destabilizing | 0.552 | D | 0.797 | deleterious | None | None | None | None | N |
V/P | 0.6966 | likely_pathogenic | 0.6931 | pathogenic | -1.41 | Destabilizing | 0.378 | N | 0.744 | deleterious | None | None | None | None | N |
V/Q | 0.959 | likely_pathogenic | 0.9579 | pathogenic | -2.19 | Highly Destabilizing | 0.552 | D | 0.725 | deleterious | None | None | None | None | N |
V/R | 0.9664 | likely_pathogenic | 0.9677 | pathogenic | -1.586 | Destabilizing | 0.378 | N | 0.801 | deleterious | None | None | None | None | N |
V/S | 0.4921 | ambiguous | 0.4676 | ambiguous | -2.831 | Highly Destabilizing | 0.08 | N | 0.696 | prob.delet. | None | None | None | None | N |
V/T | 0.4469 | ambiguous | 0.3908 | ambiguous | -2.52 | Highly Destabilizing | 0.08 | N | 0.585 | neutral | None | None | None | None | N |
V/W | 0.9942 | likely_pathogenic | 0.9939 | pathogenic | -1.786 | Destabilizing | 0.934 | D | 0.743 | deleterious | None | None | None | None | N |
V/Y | 0.9675 | likely_pathogenic | 0.9674 | pathogenic | -1.498 | Destabilizing | 0.552 | D | 0.664 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.