Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27861 | 83806;83807;83808 | chr2:178562551;178562550;178562549 | chr2:179427278;179427277;179427276 |
N2AB | 26220 | 78883;78884;78885 | chr2:178562551;178562550;178562549 | chr2:179427278;179427277;179427276 |
N2A | 25293 | 76102;76103;76104 | chr2:178562551;178562550;178562549 | chr2:179427278;179427277;179427276 |
N2B | 18796 | 56611;56612;56613 | chr2:178562551;178562550;178562549 | chr2:179427278;179427277;179427276 |
Novex-1 | 18921 | 56986;56987;56988 | chr2:178562551;178562550;178562549 | chr2:179427278;179427277;179427276 |
Novex-2 | 18988 | 57187;57188;57189 | chr2:178562551;178562550;178562549 | chr2:179427278;179427277;179427276 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 1.0 | N | 0.715 | 0.333 | 0.498641525541 | gnomAD-4.0.0 | 3.19901E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.73506E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0715 | likely_benign | 0.0773 | benign | -0.492 | Destabilizing | 0.003 | N | 0.204 | neutral | N | 0.449346791 | None | None | N |
S/C | 0.112 | likely_benign | 0.1306 | benign | -0.483 | Destabilizing | 1.0 | D | 0.515 | neutral | N | 0.509549887 | None | None | N |
S/D | 0.9445 | likely_pathogenic | 0.9595 | pathogenic | -0.193 | Destabilizing | 0.992 | D | 0.541 | neutral | None | None | None | None | N |
S/E | 0.9327 | likely_pathogenic | 0.9515 | pathogenic | -0.252 | Destabilizing | 0.96 | D | 0.551 | neutral | None | None | None | None | N |
S/F | 0.5795 | likely_pathogenic | 0.6277 | pathogenic | -0.788 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | N | 0.518438729 | None | None | N |
S/G | 0.1973 | likely_benign | 0.2334 | benign | -0.675 | Destabilizing | 0.868 | D | 0.43 | neutral | None | None | None | None | N |
S/H | 0.8691 | likely_pathogenic | 0.8919 | pathogenic | -1.156 | Destabilizing | 1.0 | D | 0.509 | neutral | None | None | None | None | N |
S/I | 0.5345 | ambiguous | 0.6252 | pathogenic | -0.13 | Destabilizing | 1.0 | D | 0.721 | deleterious | None | None | None | None | N |
S/K | 0.9794 | likely_pathogenic | 0.9862 | pathogenic | -0.788 | Destabilizing | 0.999 | D | 0.555 | neutral | None | None | None | None | N |
S/L | 0.2147 | likely_benign | 0.281 | benign | -0.13 | Destabilizing | 0.997 | D | 0.562 | neutral | None | None | None | None | N |
S/M | 0.3521 | ambiguous | 0.4215 | ambiguous | 0.091 | Stabilizing | 1.0 | D | 0.501 | neutral | None | None | None | None | N |
S/N | 0.6603 | likely_pathogenic | 0.7273 | pathogenic | -0.577 | Destabilizing | 0.935 | D | 0.576 | neutral | None | None | None | None | N |
S/P | 0.9617 | likely_pathogenic | 0.9755 | pathogenic | -0.219 | Destabilizing | 0.989 | D | 0.548 | neutral | N | 0.487574318 | None | None | N |
S/Q | 0.8822 | likely_pathogenic | 0.9045 | pathogenic | -0.824 | Destabilizing | 0.998 | D | 0.524 | neutral | None | None | None | None | N |
S/R | 0.9554 | likely_pathogenic | 0.9693 | pathogenic | -0.553 | Destabilizing | 1.0 | D | 0.544 | neutral | None | None | None | None | N |
S/T | 0.1544 | likely_benign | 0.1802 | benign | -0.644 | Destabilizing | 0.198 | N | 0.464 | neutral | N | 0.518092013 | None | None | N |
S/V | 0.3892 | ambiguous | 0.4633 | ambiguous | -0.219 | Destabilizing | 0.992 | D | 0.535 | neutral | None | None | None | None | N |
S/W | 0.7889 | likely_pathogenic | 0.815 | pathogenic | -0.755 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
S/Y | 0.6151 | likely_pathogenic | 0.669 | pathogenic | -0.516 | Destabilizing | 1.0 | D | 0.697 | prob.delet. | N | 0.485822054 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.