Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27863 | 83812;83813;83814 | chr2:178562545;178562544;178562543 | chr2:179427272;179427271;179427270 |
N2AB | 26222 | 78889;78890;78891 | chr2:178562545;178562544;178562543 | chr2:179427272;179427271;179427270 |
N2A | 25295 | 76108;76109;76110 | chr2:178562545;178562544;178562543 | chr2:179427272;179427271;179427270 |
N2B | 18798 | 56617;56618;56619 | chr2:178562545;178562544;178562543 | chr2:179427272;179427271;179427270 |
Novex-1 | 18923 | 56992;56993;56994 | chr2:178562545;178562544;178562543 | chr2:179427272;179427271;179427270 |
Novex-2 | 18990 | 57193;57194;57195 | chr2:178562545;178562544;178562543 | chr2:179427272;179427271;179427270 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | None | None | 0.664 | N | 0.389 | 0.221 | 0.353125101423 | gnomAD-4.0.0 | 6.85921E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00458E-07 | 0 | 0 |
P/S | rs768816071 | -0.361 | 0.22 | N | 0.41 | 0.155 | 0.215109475489 | gnomAD-2.1.1 | 8.17E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.12701E-04 | None | 0 | None | 0 | 0 | 0 |
P/S | rs768816071 | -0.361 | 0.22 | N | 0.41 | 0.155 | 0.215109475489 | gnomAD-4.0.0 | 4.11501E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.00954E-04 | None | 0 | 0 | 9.00448E-07 | 0 | 1.66008E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0716 | likely_benign | 0.0698 | benign | -0.72 | Destabilizing | 0.001 | N | 0.056 | neutral | N | 0.505776076 | None | None | N |
P/C | 0.3755 | ambiguous | 0.3992 | ambiguous | -0.666 | Destabilizing | 0.984 | D | 0.376 | neutral | None | None | None | None | N |
P/D | 0.7326 | likely_pathogenic | 0.7422 | pathogenic | -0.371 | Destabilizing | 0.428 | N | 0.491 | neutral | None | None | None | None | N |
P/E | 0.3936 | ambiguous | 0.4189 | ambiguous | -0.485 | Destabilizing | 0.428 | N | 0.51 | neutral | None | None | None | None | N |
P/F | 0.4848 | ambiguous | 0.5101 | ambiguous | -0.972 | Destabilizing | 0.568 | D | 0.445 | neutral | None | None | None | None | N |
P/G | 0.4488 | ambiguous | 0.4277 | ambiguous | -0.866 | Destabilizing | 0.272 | N | 0.361 | neutral | None | None | None | None | N |
P/H | 0.2685 | likely_benign | 0.2944 | benign | -0.408 | Destabilizing | 0.842 | D | 0.339 | neutral | None | None | None | None | N |
P/I | 0.1589 | likely_benign | 0.1815 | benign | -0.48 | Destabilizing | 0.568 | D | 0.428 | neutral | None | None | None | None | N |
P/K | 0.2686 | likely_benign | 0.2884 | benign | -0.406 | Destabilizing | 0.428 | N | 0.505 | neutral | None | None | None | None | N |
P/L | 0.1064 | likely_benign | 0.1178 | benign | -0.48 | Destabilizing | 0.22 | N | 0.432 | neutral | N | 0.461121207 | None | None | N |
P/M | 0.2098 | likely_benign | 0.2273 | benign | -0.31 | Destabilizing | 0.953 | D | 0.332 | neutral | None | None | None | None | N |
P/N | 0.4277 | ambiguous | 0.4536 | ambiguous | -0.132 | Destabilizing | 0.724 | D | 0.395 | neutral | None | None | None | None | N |
P/Q | 0.1639 | likely_benign | 0.1802 | benign | -0.439 | Destabilizing | 0.8 | D | 0.441 | neutral | N | 0.48914019 | None | None | N |
P/R | 0.1988 | likely_benign | 0.2201 | benign | 0.135 | Stabilizing | 0.664 | D | 0.389 | neutral | N | 0.488539897 | None | None | N |
P/S | 0.1551 | likely_benign | 0.156 | benign | -0.561 | Destabilizing | 0.22 | N | 0.41 | neutral | N | 0.484999134 | None | None | N |
P/T | 0.1075 | likely_benign | 0.1117 | benign | -0.576 | Destabilizing | 0.002 | N | 0.13 | neutral | N | 0.482276882 | None | None | N |
P/V | 0.1104 | likely_benign | 0.121 | benign | -0.525 | Destabilizing | 0.272 | N | 0.365 | neutral | None | None | None | None | N |
P/W | 0.7524 | likely_pathogenic | 0.7805 | pathogenic | -0.999 | Destabilizing | 0.984 | D | 0.405 | neutral | None | None | None | None | N |
P/Y | 0.4709 | ambiguous | 0.5105 | ambiguous | -0.687 | Destabilizing | 0.023 | N | 0.297 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.