Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2786583818;83819;83820 chr2:178562539;178562538;178562537chr2:179427266;179427265;179427264
N2AB2622478895;78896;78897 chr2:178562539;178562538;178562537chr2:179427266;179427265;179427264
N2A2529776114;76115;76116 chr2:178562539;178562538;178562537chr2:179427266;179427265;179427264
N2B1880056623;56624;56625 chr2:178562539;178562538;178562537chr2:179427266;179427265;179427264
Novex-11892556998;56999;57000 chr2:178562539;178562538;178562537chr2:179427266;179427265;179427264
Novex-21899257199;57200;57201 chr2:178562539;178562538;178562537chr2:179427266;179427265;179427264
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTC
  • RefSeq wild type template codon: GAG
  • Domain: Fn3-91
  • Domain position: 3
  • Structural Position: 3
  • Q(SASA): 0.4283
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs1267898928 -1.341 0.943 N 0.609 0.167 0.478828542108 gnomAD-2.1.1 4.09E-06 None None None None N None 0 0 None 0 0 None 0 None 0 8.97E-06 0
L/F rs1267898928 -1.341 0.943 N 0.609 0.167 0.478828542108 gnomAD-4.0.0 1.60041E-06 None None None None N None 0 0 None 0 0 None 0 0 2.86809E-06 0 0
L/P None None 0.994 N 0.768 0.4 0.737259829814 gnomAD-4.0.0 6.85811E-07 None None None None N None 0 0 None 0 0 None 0 0 9.00385E-07 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.1331 likely_benign 0.131 benign -1.576 Destabilizing 0.94 D 0.497 neutral None None None None N
L/C 0.3739 ambiguous 0.3608 ambiguous -0.891 Destabilizing 1.0 D 0.679 prob.neutral None None None None N
L/D 0.5283 ambiguous 0.5409 ambiguous -1.031 Destabilizing 0.991 D 0.76 deleterious None None None None N
L/E 0.2926 likely_benign 0.3071 benign -1.062 Destabilizing 0.988 D 0.747 deleterious None None None None N
L/F 0.1215 likely_benign 0.1142 benign -1.259 Destabilizing 0.943 D 0.609 neutral N 0.474541428 None None N
L/G 0.2731 likely_benign 0.2604 benign -1.863 Destabilizing 0.982 D 0.675 neutral None None None None N
L/H 0.1831 likely_benign 0.172 benign -1.096 Destabilizing 0.992 D 0.757 deleterious N 0.474287938 None None N
L/I 0.1545 likely_benign 0.1536 benign -0.876 Destabilizing 0.41 N 0.504 neutral N 0.463185122 None None N
L/K 0.2529 likely_benign 0.2767 benign -0.955 Destabilizing 0.763 D 0.657 neutral None None None None N
L/M 0.0999 likely_benign 0.1004 benign -0.6 Destabilizing 0.988 D 0.643 neutral None None None None N
L/N 0.2315 likely_benign 0.2074 benign -0.708 Destabilizing 0.991 D 0.761 deleterious None None None None N
L/P 0.707 likely_pathogenic 0.7269 pathogenic -1.077 Destabilizing 0.994 D 0.768 deleterious N 0.47302049 None None N
L/Q 0.1032 likely_benign 0.1026 benign -0.955 Destabilizing 0.989 D 0.749 deleterious None None None None N
L/R 0.2221 likely_benign 0.2443 benign -0.332 Destabilizing 0.971 D 0.745 deleterious N 0.462424654 None None N
L/S 0.106 likely_benign 0.0993 benign -1.298 Destabilizing 0.492 N 0.419 neutral None None None None N
L/T 0.1573 likely_benign 0.1531 benign -1.22 Destabilizing 0.825 D 0.631 neutral None None None None N
L/V 0.1172 likely_benign 0.1203 benign -1.077 Destabilizing 0.477 N 0.49 neutral N 0.505970864 None None N
L/W 0.3072 likely_benign 0.2951 benign -1.287 Destabilizing 0.999 D 0.757 deleterious None None None None N
L/Y 0.2416 likely_benign 0.2213 benign -1.061 Destabilizing 0.01 N 0.367 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.