Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27870 | 83833;83834;83835 | chr2:178562524;178562523;178562522 | chr2:179427251;179427250;179427249 |
N2AB | 26229 | 78910;78911;78912 | chr2:178562524;178562523;178562522 | chr2:179427251;179427250;179427249 |
N2A | 25302 | 76129;76130;76131 | chr2:178562524;178562523;178562522 | chr2:179427251;179427250;179427249 |
N2B | 18805 | 56638;56639;56640 | chr2:178562524;178562523;178562522 | chr2:179427251;179427250;179427249 |
Novex-1 | 18930 | 57013;57014;57015 | chr2:178562524;178562523;178562522 | chr2:179427251;179427250;179427249 |
Novex-2 | 18997 | 57214;57215;57216 | chr2:178562524;178562523;178562522 | chr2:179427251;179427250;179427249 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 0.999 | N | 0.831 | 0.582 | 0.791155293085 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/I | rs772190104 | -0.08 | 0.37 | N | 0.23 | 0.105 | 0.408036853922 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8008 | likely_pathogenic | 0.8393 | pathogenic | -1.954 | Destabilizing | 0.978 | D | 0.669 | neutral | N | 0.479098374 | None | None | N |
V/C | 0.9313 | likely_pathogenic | 0.9428 | pathogenic | -1.474 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
V/D | 0.9871 | likely_pathogenic | 0.9917 | pathogenic | -2.624 | Highly Destabilizing | 0.999 | D | 0.846 | deleterious | None | None | None | None | N |
V/E | 0.9706 | likely_pathogenic | 0.9807 | pathogenic | -2.429 | Highly Destabilizing | 0.999 | D | 0.805 | deleterious | N | 0.521143008 | None | None | N |
V/F | 0.6771 | likely_pathogenic | 0.7622 | pathogenic | -1.141 | Destabilizing | 0.998 | D | 0.781 | deleterious | None | None | None | None | N |
V/G | 0.8111 | likely_pathogenic | 0.846 | pathogenic | -2.463 | Highly Destabilizing | 0.999 | D | 0.831 | deleterious | N | 0.51105415 | None | None | N |
V/H | 0.9919 | likely_pathogenic | 0.9952 | pathogenic | -2.289 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
V/I | 0.0902 | likely_benign | 0.0912 | benign | -0.546 | Destabilizing | 0.37 | N | 0.23 | neutral | N | 0.444063975 | None | None | N |
V/K | 0.982 | likely_pathogenic | 0.988 | pathogenic | -1.675 | Destabilizing | 0.999 | D | 0.808 | deleterious | None | None | None | None | N |
V/L | 0.3941 | ambiguous | 0.4731 | ambiguous | -0.546 | Destabilizing | 0.9 | D | 0.643 | neutral | N | 0.443842183 | None | None | N |
V/M | 0.4679 | ambiguous | 0.5503 | ambiguous | -0.602 | Destabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | N |
V/N | 0.9573 | likely_pathogenic | 0.9705 | pathogenic | -1.932 | Destabilizing | 0.999 | D | 0.871 | deleterious | None | None | None | None | N |
V/P | 0.9505 | likely_pathogenic | 0.9702 | pathogenic | -0.988 | Destabilizing | 0.999 | D | 0.822 | deleterious | None | None | None | None | N |
V/Q | 0.9721 | likely_pathogenic | 0.9819 | pathogenic | -1.804 | Destabilizing | 0.999 | D | 0.843 | deleterious | None | None | None | None | N |
V/R | 0.9773 | likely_pathogenic | 0.9838 | pathogenic | -1.487 | Destabilizing | 0.999 | D | 0.871 | deleterious | None | None | None | None | N |
V/S | 0.9311 | likely_pathogenic | 0.9495 | pathogenic | -2.501 | Highly Destabilizing | 0.999 | D | 0.8 | deleterious | None | None | None | None | N |
V/T | 0.8748 | likely_pathogenic | 0.894 | pathogenic | -2.175 | Highly Destabilizing | 0.992 | D | 0.762 | deleterious | None | None | None | None | N |
V/W | 0.9904 | likely_pathogenic | 0.9948 | pathogenic | -1.7 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
V/Y | 0.961 | likely_pathogenic | 0.9773 | pathogenic | -1.301 | Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.