Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27872 | 83839;83840;83841 | chr2:178562518;178562517;178562516 | chr2:179427245;179427244;179427243 |
N2AB | 26231 | 78916;78917;78918 | chr2:178562518;178562517;178562516 | chr2:179427245;179427244;179427243 |
N2A | 25304 | 76135;76136;76137 | chr2:178562518;178562517;178562516 | chr2:179427245;179427244;179427243 |
N2B | 18807 | 56644;56645;56646 | chr2:178562518;178562517;178562516 | chr2:179427245;179427244;179427243 |
Novex-1 | 18932 | 57019;57020;57021 | chr2:178562518;178562517;178562516 | chr2:179427245;179427244;179427243 |
Novex-2 | 18999 | 57220;57221;57222 | chr2:178562518;178562517;178562516 | chr2:179427245;179427244;179427243 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs547274306 | -1.098 | 1.0 | N | 0.859 | 0.586 | 0.850441581223 | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
L/R | None | None | 0.999 | N | 0.859 | 0.575 | 0.827110624128 | gnomAD-4.0.0 | 1.37062E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.34039E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6656 | likely_pathogenic | 0.7008 | pathogenic | -1.922 | Destabilizing | 0.993 | D | 0.597 | neutral | None | None | None | None | I |
L/C | 0.8285 | likely_pathogenic | 0.8557 | pathogenic | -1.243 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
L/D | 0.9908 | likely_pathogenic | 0.9934 | pathogenic | -1.54 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
L/E | 0.9523 | likely_pathogenic | 0.9644 | pathogenic | -1.435 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
L/F | 0.5524 | ambiguous | 0.6053 | pathogenic | -1.16 | Destabilizing | 0.997 | D | 0.727 | prob.delet. | N | 0.508685883 | None | None | I |
L/G | 0.9481 | likely_pathogenic | 0.9572 | pathogenic | -2.341 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
L/H | 0.8881 | likely_pathogenic | 0.915 | pathogenic | -1.44 | Destabilizing | 1.0 | D | 0.843 | deleterious | N | 0.501148968 | None | None | I |
L/I | 0.1547 | likely_benign | 0.1645 | benign | -0.789 | Destabilizing | 0.396 | N | 0.531 | neutral | N | 0.463414953 | None | None | I |
L/K | 0.9211 | likely_pathogenic | 0.9371 | pathogenic | -1.452 | Destabilizing | 0.989 | D | 0.835 | deleterious | None | None | None | None | I |
L/M | 0.2475 | likely_benign | 0.2686 | benign | -0.666 | Destabilizing | 0.992 | D | 0.726 | prob.delet. | None | None | None | None | I |
L/N | 0.9482 | likely_pathogenic | 0.9599 | pathogenic | -1.523 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | I |
L/P | 0.8142 | likely_pathogenic | 0.8431 | pathogenic | -1.139 | Destabilizing | 1.0 | D | 0.859 | deleterious | N | 0.47949954 | None | None | I |
L/Q | 0.8613 | likely_pathogenic | 0.8869 | pathogenic | -1.551 | Destabilizing | 0.999 | D | 0.852 | deleterious | None | None | None | None | I |
L/R | 0.8582 | likely_pathogenic | 0.8842 | pathogenic | -0.943 | Destabilizing | 0.999 | D | 0.859 | deleterious | N | 0.496287122 | None | None | I |
L/S | 0.8968 | likely_pathogenic | 0.9161 | pathogenic | -2.19 | Highly Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | I |
L/T | 0.6876 | likely_pathogenic | 0.7239 | pathogenic | -1.947 | Destabilizing | 0.993 | D | 0.75 | deleterious | None | None | None | None | I |
L/V | 0.1277 | likely_benign | 0.1366 | benign | -1.139 | Destabilizing | 0.053 | N | 0.214 | neutral | N | 0.417466445 | None | None | I |
L/W | 0.8089 | likely_pathogenic | 0.8593 | pathogenic | -1.329 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
L/Y | 0.8774 | likely_pathogenic | 0.9017 | pathogenic | -1.074 | Destabilizing | 0.993 | D | 0.823 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.