Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2787283839;83840;83841 chr2:178562518;178562517;178562516chr2:179427245;179427244;179427243
N2AB2623178916;78917;78918 chr2:178562518;178562517;178562516chr2:179427245;179427244;179427243
N2A2530476135;76136;76137 chr2:178562518;178562517;178562516chr2:179427245;179427244;179427243
N2B1880756644;56645;56646 chr2:178562518;178562517;178562516chr2:179427245;179427244;179427243
Novex-11893257019;57020;57021 chr2:178562518;178562517;178562516chr2:179427245;179427244;179427243
Novex-21899957220;57221;57222 chr2:178562518;178562517;178562516chr2:179427245;179427244;179427243
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-91
  • Domain position: 10
  • Structural Position: 12
  • Q(SASA): 0.3822
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/P rs547274306 -1.098 1.0 N 0.859 0.586 0.850441581223 1000 genomes 1.99681E-04 None None None None I None 8E-04 0 None None 0 0 None None None 0 None
L/R None None 0.999 N 0.859 0.575 0.827110624128 gnomAD-4.0.0 1.37062E-06 None None None None I None 0 0 None 0 0 None 0 0 0 2.34039E-05 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.6656 likely_pathogenic 0.7008 pathogenic -1.922 Destabilizing 0.993 D 0.597 neutral None None None None I
L/C 0.8285 likely_pathogenic 0.8557 pathogenic -1.243 Destabilizing 1.0 D 0.765 deleterious None None None None I
L/D 0.9908 likely_pathogenic 0.9934 pathogenic -1.54 Destabilizing 1.0 D 0.857 deleterious None None None None I
L/E 0.9523 likely_pathogenic 0.9644 pathogenic -1.435 Destabilizing 1.0 D 0.845 deleterious None None None None I
L/F 0.5524 ambiguous 0.6053 pathogenic -1.16 Destabilizing 0.997 D 0.727 prob.delet. N 0.508685883 None None I
L/G 0.9481 likely_pathogenic 0.9572 pathogenic -2.341 Highly Destabilizing 1.0 D 0.845 deleterious None None None None I
L/H 0.8881 likely_pathogenic 0.915 pathogenic -1.44 Destabilizing 1.0 D 0.843 deleterious N 0.501148968 None None I
L/I 0.1547 likely_benign 0.1645 benign -0.789 Destabilizing 0.396 N 0.531 neutral N 0.463414953 None None I
L/K 0.9211 likely_pathogenic 0.9371 pathogenic -1.452 Destabilizing 0.989 D 0.835 deleterious None None None None I
L/M 0.2475 likely_benign 0.2686 benign -0.666 Destabilizing 0.992 D 0.726 prob.delet. None None None None I
L/N 0.9482 likely_pathogenic 0.9599 pathogenic -1.523 Destabilizing 1.0 D 0.854 deleterious None None None None I
L/P 0.8142 likely_pathogenic 0.8431 pathogenic -1.139 Destabilizing 1.0 D 0.859 deleterious N 0.47949954 None None I
L/Q 0.8613 likely_pathogenic 0.8869 pathogenic -1.551 Destabilizing 0.999 D 0.852 deleterious None None None None I
L/R 0.8582 likely_pathogenic 0.8842 pathogenic -0.943 Destabilizing 0.999 D 0.859 deleterious N 0.496287122 None None I
L/S 0.8968 likely_pathogenic 0.9161 pathogenic -2.19 Highly Destabilizing 0.999 D 0.829 deleterious None None None None I
L/T 0.6876 likely_pathogenic 0.7239 pathogenic -1.947 Destabilizing 0.993 D 0.75 deleterious None None None None I
L/V 0.1277 likely_benign 0.1366 benign -1.139 Destabilizing 0.053 N 0.214 neutral N 0.417466445 None None I
L/W 0.8089 likely_pathogenic 0.8593 pathogenic -1.329 Destabilizing 1.0 D 0.803 deleterious None None None None I
L/Y 0.8774 likely_pathogenic 0.9017 pathogenic -1.074 Destabilizing 0.993 D 0.823 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.