Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27875 | 83848;83849;83850 | chr2:178562509;178562508;178562507 | chr2:179427236;179427235;179427234 |
N2AB | 26234 | 78925;78926;78927 | chr2:178562509;178562508;178562507 | chr2:179427236;179427235;179427234 |
N2A | 25307 | 76144;76145;76146 | chr2:178562509;178562508;178562507 | chr2:179427236;179427235;179427234 |
N2B | 18810 | 56653;56654;56655 | chr2:178562509;178562508;178562507 | chr2:179427236;179427235;179427234 |
Novex-1 | 18935 | 57028;57029;57030 | chr2:178562509;178562508;178562507 | chr2:179427236;179427235;179427234 |
Novex-2 | 19002 | 57229;57230;57231 | chr2:178562509;178562508;178562507 | chr2:179427236;179427235;179427234 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.867 | N | 0.4 | 0.218 | 0.44318313171 | gnomAD-4.0.0 | 1.59558E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03012E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6142 | likely_pathogenic | 0.6154 | pathogenic | -1.561 | Destabilizing | 0.998 | D | 0.481 | neutral | N | 0.479690578 | None | None | N |
V/C | 0.9184 | likely_pathogenic | 0.9215 | pathogenic | -1.792 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
V/D | 0.951 | likely_pathogenic | 0.9607 | pathogenic | -2.089 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
V/E | 0.8884 | likely_pathogenic | 0.9038 | pathogenic | -2.055 | Highly Destabilizing | 0.999 | D | 0.827 | deleterious | N | 0.510556717 | None | None | N |
V/F | 0.6316 | likely_pathogenic | 0.6713 | pathogenic | -1.394 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
V/G | 0.7532 | likely_pathogenic | 0.7769 | pathogenic | -1.873 | Destabilizing | 1.0 | D | 0.84 | deleterious | N | 0.512077654 | None | None | N |
V/H | 0.9646 | likely_pathogenic | 0.9674 | pathogenic | -1.418 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
V/I | 0.0963 | likely_benign | 0.0995 | benign | -0.781 | Destabilizing | 0.359 | N | 0.286 | neutral | None | None | None | None | N |
V/K | 0.8947 | likely_pathogenic | 0.8995 | pathogenic | -1.26 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
V/L | 0.6451 | likely_pathogenic | 0.6533 | pathogenic | -0.781 | Destabilizing | 0.867 | D | 0.4 | neutral | N | 0.483778728 | None | None | N |
V/M | 0.3814 | ambiguous | 0.4066 | ambiguous | -0.915 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | N | 0.517166535 | None | None | N |
V/N | 0.8546 | likely_pathogenic | 0.878 | pathogenic | -1.31 | Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
V/P | 0.9914 | likely_pathogenic | 0.9899 | pathogenic | -1.01 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
V/Q | 0.8641 | likely_pathogenic | 0.8748 | pathogenic | -1.5 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
V/R | 0.858 | likely_pathogenic | 0.864 | pathogenic | -0.838 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
V/S | 0.7201 | likely_pathogenic | 0.7453 | pathogenic | -1.837 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
V/T | 0.4979 | ambiguous | 0.5028 | ambiguous | -1.69 | Destabilizing | 0.995 | D | 0.601 | neutral | None | None | None | None | N |
V/W | 0.9864 | likely_pathogenic | 0.989 | pathogenic | -1.587 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
V/Y | 0.9309 | likely_pathogenic | 0.9386 | pathogenic | -1.231 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.