Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27877 | 83854;83855;83856 | chr2:178562503;178562502;178562501 | chr2:179427230;179427229;179427228 |
N2AB | 26236 | 78931;78932;78933 | chr2:178562503;178562502;178562501 | chr2:179427230;179427229;179427228 |
N2A | 25309 | 76150;76151;76152 | chr2:178562503;178562502;178562501 | chr2:179427230;179427229;179427228 |
N2B | 18812 | 56659;56660;56661 | chr2:178562503;178562502;178562501 | chr2:179427230;179427229;179427228 |
Novex-1 | 18937 | 57034;57035;57036 | chr2:178562503;178562502;178562501 | chr2:179427230;179427229;179427228 |
Novex-2 | 19004 | 57235;57236;57237 | chr2:178562503;178562502;178562501 | chr2:179427230;179427229;179427228 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/C | rs527624888 | -0.423 | 0.036 | N | 0.536 | 0.139 | 0.343101102393 | gnomAD-2.1.1 | 3.59E-05 | None | None | None | None | N | None | 4.14E-05 | 8.57E-05 | None | 0 | 5.17E-05 | None | 1.66301E-04 | None | 0 | 0 | 0 |
R/C | rs527624888 | -0.423 | 0.036 | N | 0.536 | 0.139 | 0.343101102393 | gnomAD-3.1.2 | 3.95E-05 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 1.03648E-03 | 0 |
R/C | rs527624888 | -0.423 | 0.036 | N | 0.536 | 0.139 | 0.343101102393 | 1000 genomes | 3.99361E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 2E-03 | None |
R/C | rs527624888 | -0.423 | 0.036 | N | 0.536 | 0.139 | 0.343101102393 | gnomAD-4.0.0 | 1.92252E-05 | None | None | None | None | N | None | 2.67094E-05 | 6.68606E-05 | None | 0 | 6.69792E-05 | None | 1.5647E-05 | 3.30469E-04 | 2.54351E-06 | 1.76495E-04 | 0 |
R/G | None | None | 0.697 | N | 0.628 | 0.131 | 0.341934017632 | gnomAD-4.0.0 | 1.36955E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7994E-06 | 0 | 0 |
R/H | rs371345921 | -1.15 | 0.979 | N | 0.489 | 0.215 | 0.218112801441 | gnomAD-2.1.1 | 5.03E-05 | None | None | None | None | N | None | 1.65577E-04 | 1.14155E-04 | None | 0 | 0 | None | 9.97E-05 | None | 0 | 2.35E-05 | 0 |
R/H | rs371345921 | -1.15 | 0.979 | N | 0.489 | 0.215 | 0.218112801441 | gnomAD-3.1.2 | 4.6E-05 | None | None | None | None | N | None | 1.20744E-04 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/H | rs371345921 | -1.15 | 0.979 | N | 0.489 | 0.215 | 0.218112801441 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 1.4E-03 | None | None | 0 | 0 | None | None | None | 0 | None |
R/H | rs371345921 | -1.15 | 0.979 | N | 0.489 | 0.215 | 0.218112801441 | gnomAD-4.0.0 | 2.29462E-05 | None | None | None | None | N | None | 1.06775E-04 | 8.36037E-05 | None | 0 | 0 | None | 0 | 0 | 9.32632E-06 | 1.3238E-04 | 1.60179E-05 |
R/L | rs371345921 | None | 0.324 | N | 0.629 | 0.201 | 0.289474373501 | gnomAD-4.0.0 | 2.05442E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69917E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.388 | ambiguous | 0.3917 | ambiguous | -0.295 | Destabilizing | 0.199 | N | 0.611 | neutral | None | None | None | None | N |
R/C | 0.187 | likely_benign | 0.1906 | benign | -0.179 | Destabilizing | 0.036 | N | 0.536 | neutral | N | 0.470470185 | None | None | N |
R/D | 0.7676 | likely_pathogenic | 0.783 | pathogenic | -0.169 | Destabilizing | 0.895 | D | 0.64 | neutral | None | None | None | None | N |
R/E | 0.4141 | ambiguous | 0.4381 | ambiguous | -0.114 | Destabilizing | 0.265 | N | 0.509 | neutral | None | None | None | None | N |
R/F | 0.7431 | likely_pathogenic | 0.7506 | pathogenic | -0.548 | Destabilizing | 0.773 | D | 0.708 | prob.delet. | None | None | None | None | N |
R/G | 0.2448 | likely_benign | 0.2482 | benign | -0.504 | Destabilizing | 0.697 | D | 0.628 | neutral | N | 0.46972485 | None | None | N |
R/H | 0.1425 | likely_benign | 0.1451 | benign | -0.977 | Destabilizing | 0.979 | D | 0.489 | neutral | N | 0.512784981 | None | None | N |
R/I | 0.4723 | ambiguous | 0.4964 | ambiguous | 0.228 | Stabilizing | 0.636 | D | 0.709 | prob.delet. | None | None | None | None | N |
R/K | 0.1067 | likely_benign | 0.1083 | benign | -0.29 | Destabilizing | 0.002 | N | 0.18 | neutral | None | None | None | None | N |
R/L | 0.3604 | ambiguous | 0.373 | ambiguous | 0.228 | Stabilizing | 0.324 | N | 0.629 | neutral | N | 0.476293082 | None | None | N |
R/M | 0.3949 | ambiguous | 0.4101 | ambiguous | 0.076 | Stabilizing | 0.976 | D | 0.591 | neutral | None | None | None | None | N |
R/N | 0.6174 | likely_pathogenic | 0.6288 | pathogenic | 0.18 | Stabilizing | 0.895 | D | 0.507 | neutral | None | None | None | None | N |
R/P | 0.6915 | likely_pathogenic | 0.7103 | pathogenic | 0.074 | Stabilizing | 0.98 | D | 0.691 | prob.neutral | N | 0.483038077 | None | None | N |
R/Q | 0.1049 | likely_benign | 0.1065 | benign | -0.063 | Destabilizing | 0.757 | D | 0.569 | neutral | None | None | None | None | N |
R/S | 0.4977 | ambiguous | 0.5077 | ambiguous | -0.323 | Destabilizing | 0.697 | D | 0.627 | neutral | N | 0.439033796 | None | None | N |
R/T | 0.362 | ambiguous | 0.3858 | ambiguous | -0.134 | Destabilizing | 0.546 | D | 0.611 | neutral | None | None | None | None | N |
R/V | 0.5151 | ambiguous | 0.5389 | ambiguous | 0.074 | Stabilizing | 0.388 | N | 0.645 | neutral | None | None | None | None | N |
R/W | 0.2749 | likely_benign | 0.2931 | benign | -0.475 | Destabilizing | 0.993 | D | 0.793 | deleterious | None | None | None | None | N |
R/Y | 0.5187 | ambiguous | 0.5298 | ambiguous | -0.084 | Destabilizing | 0.912 | D | 0.683 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.