Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2787783854;83855;83856 chr2:178562503;178562502;178562501chr2:179427230;179427229;179427228
N2AB2623678931;78932;78933 chr2:178562503;178562502;178562501chr2:179427230;179427229;179427228
N2A2530976150;76151;76152 chr2:178562503;178562502;178562501chr2:179427230;179427229;179427228
N2B1881256659;56660;56661 chr2:178562503;178562502;178562501chr2:179427230;179427229;179427228
Novex-11893757034;57035;57036 chr2:178562503;178562502;178562501chr2:179427230;179427229;179427228
Novex-21900457235;57236;57237 chr2:178562503;178562502;178562501chr2:179427230;179427229;179427228
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: CGT
  • RefSeq wild type template codon: GCA
  • Domain: Fn3-91
  • Domain position: 15
  • Structural Position: 17
  • Q(SASA): 0.5648
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/C rs527624888 -0.423 0.036 N 0.536 0.139 0.343101102393 gnomAD-2.1.1 3.59E-05 None None None None N None 4.14E-05 8.57E-05 None 0 5.17E-05 None 1.66301E-04 None 0 0 0
R/C rs527624888 -0.423 0.036 N 0.536 0.139 0.343101102393 gnomAD-3.1.2 3.95E-05 None None None None N None 2.42E-05 0 0 0 0 None 0 0 0 1.03648E-03 0
R/C rs527624888 -0.423 0.036 N 0.536 0.139 0.343101102393 1000 genomes 3.99361E-04 None None None None N None 0 0 None None 0 0 None None None 2E-03 None
R/C rs527624888 -0.423 0.036 N 0.536 0.139 0.343101102393 gnomAD-4.0.0 1.92252E-05 None None None None N None 2.67094E-05 6.68606E-05 None 0 6.69792E-05 None 1.5647E-05 3.30469E-04 2.54351E-06 1.76495E-04 0
R/G None None 0.697 N 0.628 0.131 0.341934017632 gnomAD-4.0.0 1.36955E-06 None None None None N None 0 0 None 0 0 None 0 0 1.7994E-06 0 0
R/H rs371345921 -1.15 0.979 N 0.489 0.215 0.218112801441 gnomAD-2.1.1 5.03E-05 None None None None N None 1.65577E-04 1.14155E-04 None 0 0 None 9.97E-05 None 0 2.35E-05 0
R/H rs371345921 -1.15 0.979 N 0.489 0.215 0.218112801441 gnomAD-3.1.2 4.6E-05 None None None None N None 1.20744E-04 6.56E-05 0 0 0 None 0 0 1.47E-05 0 0
R/H rs371345921 -1.15 0.979 N 0.489 0.215 0.218112801441 1000 genomes 1.99681E-04 None None None None N None 0 1.4E-03 None None 0 0 None None None 0 None
R/H rs371345921 -1.15 0.979 N 0.489 0.215 0.218112801441 gnomAD-4.0.0 2.29462E-05 None None None None N None 1.06775E-04 8.36037E-05 None 0 0 None 0 0 9.32632E-06 1.3238E-04 1.60179E-05
R/L rs371345921 None 0.324 N 0.629 0.201 0.289474373501 gnomAD-4.0.0 2.05442E-05 None None None None N None 0 0 None 0 0 None 0 0 2.69917E-05 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.388 ambiguous 0.3917 ambiguous -0.295 Destabilizing 0.199 N 0.611 neutral None None None None N
R/C 0.187 likely_benign 0.1906 benign -0.179 Destabilizing 0.036 N 0.536 neutral N 0.470470185 None None N
R/D 0.7676 likely_pathogenic 0.783 pathogenic -0.169 Destabilizing 0.895 D 0.64 neutral None None None None N
R/E 0.4141 ambiguous 0.4381 ambiguous -0.114 Destabilizing 0.265 N 0.509 neutral None None None None N
R/F 0.7431 likely_pathogenic 0.7506 pathogenic -0.548 Destabilizing 0.773 D 0.708 prob.delet. None None None None N
R/G 0.2448 likely_benign 0.2482 benign -0.504 Destabilizing 0.697 D 0.628 neutral N 0.46972485 None None N
R/H 0.1425 likely_benign 0.1451 benign -0.977 Destabilizing 0.979 D 0.489 neutral N 0.512784981 None None N
R/I 0.4723 ambiguous 0.4964 ambiguous 0.228 Stabilizing 0.636 D 0.709 prob.delet. None None None None N
R/K 0.1067 likely_benign 0.1083 benign -0.29 Destabilizing 0.002 N 0.18 neutral None None None None N
R/L 0.3604 ambiguous 0.373 ambiguous 0.228 Stabilizing 0.324 N 0.629 neutral N 0.476293082 None None N
R/M 0.3949 ambiguous 0.4101 ambiguous 0.076 Stabilizing 0.976 D 0.591 neutral None None None None N
R/N 0.6174 likely_pathogenic 0.6288 pathogenic 0.18 Stabilizing 0.895 D 0.507 neutral None None None None N
R/P 0.6915 likely_pathogenic 0.7103 pathogenic 0.074 Stabilizing 0.98 D 0.691 prob.neutral N 0.483038077 None None N
R/Q 0.1049 likely_benign 0.1065 benign -0.063 Destabilizing 0.757 D 0.569 neutral None None None None N
R/S 0.4977 ambiguous 0.5077 ambiguous -0.323 Destabilizing 0.697 D 0.627 neutral N 0.439033796 None None N
R/T 0.362 ambiguous 0.3858 ambiguous -0.134 Destabilizing 0.546 D 0.611 neutral None None None None N
R/V 0.5151 ambiguous 0.5389 ambiguous 0.074 Stabilizing 0.388 N 0.645 neutral None None None None N
R/W 0.2749 likely_benign 0.2931 benign -0.475 Destabilizing 0.993 D 0.793 deleterious None None None None N
R/Y 0.5187 ambiguous 0.5298 ambiguous -0.084 Destabilizing 0.912 D 0.683 prob.neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.